Chlamydiae Database

A comparative genomics database of the Planctomycetes-Verrucomicrobia-Chlamydiae superphylum

Content of the database & main features

  • 277 PVC genomes (see the phylogeny)
  • Orthologous proteins identified with OrthoFinder
  • Detailed annotation of proteins based on
    • KEGG (Kegg orthologs)
    • COG (clusters of orthologous groups)
    • STRING (protein-protein interactions)
    • PRIAM (enzymes)
    • TCDB (curated transporters annotation)
    • SwissProt (manually annotated proteins)
    • InterproScan (domains and signatures)
    • DOOR (operons)
  • Precomputed homology searches with RefSeq and SwissProt databases for each protein
  • Precomputed phylogenetic reconstructions of orthologous groups including the closest RefSeq homologs
  • Pfam and COG phylogenetic profiles allowing to identify chlamydial domains/proteins rarely found in other prokaryotes (see for example PF01823)
  • Identification of conserved gene neighborhood among distantly related Chlamydiae and PVC (see for example the paper from Dandekar et al. for the rationale behind this)
  • Multiple tools allowing comparative analyses of Chlamydiae genomes
  • References to scientific publications collected from multiple sources
    •

Latest News

December 02, 2019

Updated references to litterature (reported in the "Pubmed" tab available on each locus page) using data from STRING version 11.

November 26, 2019

New feature: Proteins associated to the same Pubmed entry (data from PaperBlast) can be retrieved from the "PubMed" tab on each locus page. See for example papers associated to the chaperone Scc2/CT576 and the 9 C. trachomatis proteins associated to the publication from Fields et al. (Analysis of putative Chlamydia trachomatis chaperones Scc2 and Scc3 and their use in the identification of type III secretion substrates, J Bacteriol. 2005).

October 22, 2019

Updated references to litterature (reported in the "Pubmed" tab available on each locus page) using the PaperBlast database from September 25 2019.

June 2019

Release 2.0 of the database with 277 PVC genomes.

Citation

ChlamDB: a comparative genomics database of the phylum Chlamydiae and other members of the Planctomycetes-Verrucomicrobiae-Chlamydiae superphylum
Trestan Pillonel, Florian Tagini, Claire Bertelli, Gilbert Greub
Nucleic Acids Research, 2019, https://doi.org/10.1093/nar/gkz924
Accession GC N proteins N contigs Size Percent non coding Organism Browse Online gbk faa fna ffn tab
AE002162 35.72 7 1 7501 21.65 Chlamydia muridarum Nigg plasmid pMoPn AE002162 GBK FAA FNA FFN TAB
BA000008 40.58 1069 1 1226565 9.91 Chlamydia pneumoniae J138 genomic BA000008 GBK FAA FNA FFN TAB
HE601809 41.31 894 1 1042783 8.95 Chlamydia trachomatis Ia/SotonIa3 HE601809 GBK FAA FNA FFN TAB
HE601950 41.33 892 1 1039261 8.98 Chlamydia trachomatis L1/440/LN HE601950 GBK FAA FNA FFN TAB
HE603218 36.21 8 1 7500 7.0 Chlamydia trachomatis L1/115 plasmid pL1115 sequence HE603218 GBK FAA FNA FFN TAB
HE601952 41.33 889 1 1039084 9.02 Chlamydia trachomatis L1/115 HE601952 GBK FAA FNA FFN TAB
HE603220 36.23 8 1 7500 7.0 Chlamydia trachomatis L1/224 plasmid pL1224 sequence HE603220 GBK FAA FNA FFN TAB
HE601953 41.33 890 1 1038819 8.99 Chlamydia trachomatis L1/224 HE601953 GBK FAA FNA FFN TAB
HE601954 41.33 890 1 1038839 9.03 Chlamydia trachomatis L2/25667R HE601954 GBK FAA FNA FFN TAB
HE603222 36.23 8 1 7500 7.0 Chlamydia trachomatis L2b/8200/07 plasmid pL2b820007 sequence HE603222 GBK FAA FNA FFN TAB
HE601795 41.33 890 1 1038864 8.98 Chlamydia trachomatis L2b/8200/07 HE601795 GBK FAA FNA FFN TAB
HE603227 36.2 8 1 7473 6.66 Chlamydia trachomatis L2b/UCH-2 plasmid pL2bUCH2 sequence HE603227 GBK FAA FNA FFN TAB
BX908798 34.72 2031 1 2414465 17.09 Parachlamydia-related symbiont UWE25 BX908798 GBK FAA FNA FFN TAB
HE601956 41.33 890 1 1038864 8.98 Chlamydia trachomatis L2b/UCH-2 HE601956 GBK FAA FNA FFN TAB
HE603221 36.23 8 1 7500 7.0 Chlamydia trachomatis L2b/795 L2b795 plasmid 1 HE603221 GBK FAA FNA FFN TAB
HE601949 41.33 890 1 1038720 9.0 Chlamydia trachomatis L2b/795 HE601949 GBK FAA FNA FFN TAB
HE603228 36.32 7 1 7415 18.31 Chlamydia trachomatis L3/404/LN plasmid pL3404 sequence HE603228 GBK FAA FNA FFN TAB
HE601955 41.33 888 1 1039257 9.02 Chlamydia trachomatis L3/404/LN HE601955 GBK FAA FNA FFN TAB
CP002744 39.06 1017 1 1163362 12.36 Chlamydia psittaci Mat116 CP002744 GBK FAA FNA FFN TAB
CP003964 36.23 7 1 7499 20.07 Chlamydia trachomatis L2/434/Bu(i) plasmid pL2/434/Bu(i) CP003964 GBK FAA FNA FFN TAB
CP003963 41.33 903 1 1038842 9.75 Chlamydia trachomatis L2/434/Bu(i) CP003963 GBK FAA FNA FFN TAB
CP003966 36.23 7 1 7499 20.07 Chlamydia trachomatis L2/434/Bu(f) plasmid pL2/434/Bu(f) CP003966 GBK FAA FNA FFN TAB
CP003965 41.33 903 1 1038842 9.75 Chlamydia trachomatis L2/434/Bu(f) CP003965 GBK FAA FNA FFN TAB
CP000052 36.27 8 1 7510 7.96 Chlamydia trachomatis A/HAR-13 plasmid pCTA CP000052 GBK FAA FNA FFN TAB
ATNB01000000 38.65 1253 153 1213046 9.26 Chlamydia ibidis 10_1398_11 ATNB01000000 GBK FAA FNA FFN TAB
CP002671 41.32 924 1 1046087 9.67 Chlamydia trachomatis RC-F/69 CP002671 GBK FAA FNA FFN TAB
CP002672 41.33 925 1 1038817 9.11 Chlamydia trachomatis RC-L2(s)/46 CP002672 GBK FAA FNA FFN TAB
CP002673 41.51 954 1 1083893 9.97 Chlamydia trachomatis RC-F(s)/852 CP002673 GBK FAA FNA FFN TAB
CP002674 41.33 926 1 1038797 8.87 Chlamydia trachomatis RC-J/943 CP002674 GBK FAA FNA FFN TAB
CP002675 41.33 920 1 1038792 9.01 Chlamydia trachomatis RC-J/953 CP002675 GBK FAA FNA FFN TAB
CP002676 41.31 919 1 1046171 9.93 Chlamydia trachomatis RC-L2(s)/3 CP002676 GBK FAA FNA FFN TAB
CP002677 41.51 951 1 1083842 10.0 Chlamydia trachomatis RC-F(s)/342 CP002677 GBK FAA FNA FFN TAB
CP002678 41.49 935 1 1061854 9.9 Chlamydia trachomatis RC-J(s)/122 CP002678 GBK FAA FNA FFN TAB
CP002679 41.33 926 1 1038839 8.91 Chlamydia trachomatis RC-J/966 CP002679 GBK FAA FNA FFN TAB
CP000051 41.3 911 1 1044459 8.72 Chlamydia trachomatis A/HAR-13 CP000051 GBK FAA FNA FFN TAB
CP002680 41.51 956 1 1080953 9.04 Chlamydia trachomatis J/6276tet1 CP002680 GBK FAA FNA FFN TAB
CP002681 41.33 925 1 1038442 9.01 Chlamydia trachomatis RC-J/971 CP002681 GBK FAA FNA FFN TAB
CP002682 41.33 927 1 1038870 8.94 Chlamydia trachomatis RC-L2/55 CP002682 GBK FAA FNA FFN TAB
APJW01000000 38.32 1018 4 1146066 9.42 Chlamydia ibidis 10-1398/6 APJW01000000 GBK FAA FNA FFN TAB
CP004033 41.13 921 1 1104552 7.39 Chlamydia pecorum PV3056/3 CP004033 GBK FAA FNA FFN TAB
CP004034 41.11 925 1 1106534 7.18 Chlamydia pecorum W73 CP004034 GBK FAA FNA FFN TAB
CP004035 41.1 925 1 1106409 7.14 Chlamydia pecorum P787 CP004035 GBK FAA FNA FFN TAB
CP015841 31.75 8 1 7619 19.04 Chlamydia gallinacea 08-1274/3 plasmid p1274 CP015841 GBK FAA FNA FFN TAB
CP015840 37.94 892 1 1059583 9.34 Chlamydia gallinacea 08-1274/3 CP015840 GBK FAA FNA FFN TAB
CP006946 36.25 8 1 7501 7.97 Chlamydia trachomatis C/TW-3 plasmid unnamed CP006946 GBK FAA FNA FFN TAB
CP000975 45.48 2472 1 2287145 8.79 Methylacidiphilum infernorum V4 CP000975 GBK FAA FNA FFN TAB
CP006945 41.3 920 1 1043554 9.92 Chlamydia trachomatis C/TW-3 CP006945 GBK FAA FNA FFN TAB
CP006572 31.22 7 1 7099 19.5 Chlamydia avium 10DC88 plasmid p10DC88 CP006572 GBK FAA FNA FFN TAB
CP006571 36.92 940 1 1041170 9.17 Chlamydia avium 10DC88 CP006571 GBK FAA FNA FFN TAB
CP006671 41.31 923 1 1042588 9.48 Chlamydia trachomatis F/1-93 CP006671 GBK FAA FNA FFN TAB
CP006673 41.31 930 1 1042767 8.44 Chlamydia trachomatis F/6-94 CP006673 GBK FAA FNA FFN TAB
CP006674 41.31 928 1 1042853 8.67 Chlamydia trachomatis F/11-96 CP006674 GBK FAA FNA FFN TAB
CP006676 41.31 931 1 1042752 8.37 Chlamydia trachomatis D/13-96 CP006676 GBK FAA FNA FFN TAB
CP006680 41.31 924 1 1043207 8.53 Chlamydia trachomatis J/31-98 CP006680 GBK FAA FNA FFN TAB
AP017978 37.83 172 1 231307 20.36 Neochlamydia sp. S13 plasmid pS13 AP017978 GBK FAA FNA FFN TAB
AP017977 38.04 2002 1 2586667 21.87 Neochlamydia sp. S13 AP017977 GBK FAA FNA FFN TAB
CP001032 65.34 4612 1 5957605 11.28 Opitutus terrae PB90-1 CP001032 GBK FAA FNA FFN TAB
CP007276 40.34 888 1 1072952 9.14 Chlamydia muridarum Nigg 2 MCR CP007276 GBK FAA FNA FFN TAB
CCEJ010000000 38.24 2418 23 2969604 9.9 Criblamydia sequanensis CRIB-18 CCEJ010000000 GBK FAA FNA FFN TAB
CP009608 40.34 887 1 1072952 8.75 Chlamydia muridarum Nigg3 CP009608 GBK FAA FNA FFN TAB
CP009609 40.34 891 1 1072952 8.66 Chlamydia muridarum Nigg3 CP009609 GBK FAA FNA FFN TAB
CP009760 40.34 894 1 1072951 8.52 Chlamydia muridarum Nigg3 CP009760 GBK FAA FNA FFN TAB
JSAM01000000 39.04 2755 162 3008885 11.54 Parachlamydia acanthamoebae OEW1 JSAM01000000 GBK FAA FNA FFN TAB
JSAN01000000 34.82 2149 178 2397675 17.6 Candidatus Protochlamydia amoebophila EI2 JSAN01000000 GBK FAA FNA FFN TAB
JRXI01000000 38.02 2344 254 2546323 18.79 Neochlamydia sp. TUME1 JRXI01000000 GBK FAA FNA FFN TAB
JSDQ01000000 38.09 2173 112 2530677 20.25 Neochlamydia sp. EPS4 JSDQ01000000 GBK FAA FNA FFN TAB
CP006974 40.34 924 1 1072951 8.26 Chlamydia muridarum Nigg3 CMUT3-5 Nigg CP006974 GBK FAA FNA FFN TAB
CP001071 55.76 2138 1 2664102 12.23 Akkermansia muciniphila ATCC BAA-835 CP001071 GBK FAA FNA FFN TAB
CP006975 40.34 924 1 1072952 8.26 Chlamydia muridarum Nigg CM972 CP006975 GBK FAA FNA FFN TAB
LN554882 39.86 933 1 1144467 8.73 Chlamydia abortus AB7 LN554882 GBK FAA FNA FFN TAB
CP009924 36.23 8 1 7500 8.0 Chlamydia trachomatis L2b/CS19/08 plasmid 1 CP009924 GBK FAA FNA FFN TAB
CP009923 41.33 902 1 1038864 9.07 Chlamydia trachomatis L2b/CS19/08 CP009923 GBK FAA FNA FFN TAB
CP009926 36.23 8 1 7500 8.0 Chlamydia trachomatis L2b/CS784/08 plasmid 1 CP009926 GBK FAA FNA FFN TAB
CP009925 41.33 902 1 1038864 9.07 Chlamydia trachomatis L2b/CS784/08 CP009925 GBK FAA FNA FFN TAB
CP011265 61.28 2640 1 4001000 23.51 Verrucomicrobia bacterium IMCC26134 CP011265 GBK FAA FNA FFN TAB
LN846980 40.58 1123 1 1228125 8.54 Chlamydia pneumoniae LN846980 GBK FAA FNA FFN TAB
LN847221 40.58 1129 1 1228523 8.53 Chlamydia pneumoniae LN847221 GBK FAA FNA FFN TAB
LN847000 40.58 1133 1 1228579 8.48 Chlamydia pneumoniae LN847000 GBK FAA FNA FFN TAB
CP001714 33.03 8 1 7530 6.06 Chlamydia pneumoniae LPCoLN plasmid CP001714 GBK FAA FNA FFN TAB
LN847257 40.58 1128 1 1228576 8.53 Chlamydia pneumoniae LN847257 GBK FAA FNA FFN TAB
LN846996 40.58 1123 1 1228123 8.59 Chlamydia pneumoniae LN846996 GBK FAA FNA FFN TAB
LN846995 40.58 1128 1 1229887 8.55 Chlamydia pneumoniae LN846995 GBK FAA FNA FFN TAB
LN847241 40.58 1131 1 1228126 8.54 Chlamydia pneumoniae LN847241 GBK FAA FNA FFN TAB
CP010904 63.31 2420 1 2949723 10.49 Kiritimatiella glycovorans L21-Fru-AB CP010904 GBK FAA FNA FFN TAB
CP007132 36.33 8 1 7493 7.99 Chlamydia trachomatis D/CS637/11 plasmid unnamed CP007132 GBK FAA FNA FFN TAB
CP007131 41.31 925 1 1042680 9.0 Chlamydia trachomatis D/CS637/11 CP007131 GBK FAA FNA FFN TAB
CP010568 36.23 8 1 7502 8.02 Chlamydia trachomatis E/CS1025/11 plasmid 1 CP010568 GBK FAA FNA FFN TAB
CP010567 41.31 904 1 1043034 9.06 Chlamydia trachomatis E/CS1025/11 CP010567 GBK FAA FNA FFN TAB
CP010570 36.23 8 1 7493 8.03 Chlamydia trachomatis F/CS847/08 plasmid 1 CP010570 GBK FAA FNA FFN TAB
CP001713 40.55 1097 1 1241020 9.94 Chlamydia pneumoniae LPCoLN CP001713 GBK FAA FNA FFN TAB
CP010569 41.31 903 1 1043060 9.1 Chlamydia trachomatis F/CS847/08 CP010569 GBK FAA FNA FFN TAB
CP010572 36.3 8 1 7471 7.76 Chlamydia trachomatis Ia/CS190/96 plasmid 1 CP010572 GBK FAA FNA FFN TAB
CP010571 41.31 905 1 1042034 8.89 Chlamydia trachomatis Ia/CS190/96 CP010571 GBK FAA FNA FFN TAB
LJUH01000000 26.23 986 67 1126604 9.41 Chlamydiae bacterium SM23_39 LJUH01000000 GBK FAA FNA FFN TAB
CP012665 47.73 817 1 915884 15.48 Xiphinematobacter sp. Idaho Grape CP012665 GBK FAA FNA FFN TAB
LN879503 37.21 160 1 145285 19.45 Candidatus Protochlamydia naegleriophila KNic plasmid 1 LN879503 GBK FAA FNA FFN TAB
LN879502 42.7 2415 1 2885090 14.89 Candidatus Protochlamydia naegleriophila KNic LN879502 GBK FAA FNA FFN TAB
CP011270 65.56 6521 1 8442773 17.28 Planctomyces sp. SH-PL14 CP011270 GBK FAA FNA FFN TAB
CP011271 64.22 7704 1 9045424 13.49 Gemmata sp. SH-PL17 CP011271 GBK FAA FNA FFN TAB
CP011272 54.25 5328 1 6534136 10.28 Pirellula sp. SH-Sr6A CP011272 GBK FAA FNA FFN TAB
CP001848 57.46 4717 1 6196199 14.11 Pirellula staleyi DSM 6068 CP001848 GBK FAA FNA FFN TAB
CP011274 69.02 77 1 97874 14.37 Planctomyces sp. SH-PL62 plasmid pPL62-1 CP011274 GBK FAA FNA FFN TAB
CP011275 67.74 65 1 86054 15.93 Planctomyces sp. SH-PL62 plasmid pPL62-2 CP011275 GBK FAA FNA FFN TAB
CP011276 69.41 58 1 81115 13.15 Planctomyces sp. SH-PL62 plasmid pPL62-3 CP011276 GBK FAA FNA FFN TAB
CP011277 66.67 18 1 12514 31.84 Planctomyces sp. SH-PL62 plasmid pPL62-4 CP011277 GBK FAA FNA FFN TAB
CP011273 69.3 5056 1 6507102 13.58 Planctomyces sp. SH-PL62 CP011273 GBK FAA FNA FFN TAB
CP014640 32.29 8 1 7504 7.25 Chlamydia sp. 2742-308 plasmid CP014640 GBK FAA FNA FFN TAB
CP014639 38.54 996 1 1113233 9.51 Chlamydia sp. 2742-308 genome CP014639 GBK FAA FNA FFN TAB
CP015295 36.24 8 1 7502 8.42 Chlamydia trachomatis E-103 plasmid 1 CP015295 GBK FAA FNA FFN TAB
CP015294 41.31 905 1 1043019 8.91 Chlamydia trachomatis E-103 CP015294 GBK FAA FNA FFN TAB
CP015297 36.24 8 1 7502 8.42 Chlamydia trachomatis E-160 plasmid 1 CP015297 GBK FAA FNA FFN TAB
AE002160 40.34 904 1 1072950 8.85 Chlamydia muridarum Nigg AE002160 GBK FAA FNA FFN TAB
CP001998 53.6 3120 1 3750771 9.81 Coraliomargarita akajimensis DSM 45221 CP001998 GBK FAA FNA FFN TAB
CP015296 41.31 905 1 1043007 8.83 Chlamydia trachomatis E-160 CP015296 GBK FAA FNA FFN TAB
CP015299 36.24 8 1 7502 8.42 Chlamydia trachomatis E-547 plasmid 1 CP015299 GBK FAA FNA FFN TAB
CP015298 41.31 904 1 1043003 8.86 Chlamydia trachomatis E-547 CP015298 GBK FAA FNA FFN TAB
CP015301 36.22 8 1 7493 8.43 Chlamydia trachomatis E-8873 plasmid 1 CP015301 GBK FAA FNA FFN TAB
CP015300 41.31 904 1 1042717 8.88 Chlamydia trachomatis E-8873 CP015300 GBK FAA FNA FFN TAB
CP015303 36.23 8 1 7502 8.42 Chlamydia trachomatis E-32931 plasmid 1 CP015303 GBK FAA FNA FFN TAB
CP015302 41.3 912 1 1048917 9.0 Chlamydia trachomatis E-32931 CP015302 GBK FAA FNA FFN TAB
CP015305 36.22 8 1 7502 8.42 Chlamydia trachomatis E-DK-20 plasmid 1 CP015305 GBK FAA FNA FFN TAB
CP015304 41.31 903 1 1048033 9.32 Chlamydia trachomatis E-DK-20 CP015304 GBK FAA FNA FFN TAB
CP015307 36.25 8 1 7493 8.43 Chlamydia trachomatis F-6068 plasmid 1 CP015307 GBK FAA FNA FFN TAB
CR848038 39.87 932 1 1144377 11.64 Chlamydia abortus S26/3 CR848038 GBK FAA FNA FFN TAB
CP015306 41.31 903 1 1042738 8.9 Chlamydia trachomatis F-6068 CP015306 GBK FAA FNA FFN TAB
CP015409 55.66 2333 1 2745278 11.43 Akkermansia muciniphila YL44 CP015409 GBK FAA FNA FFN TAB
CP016094 66.48 3510 1 4199284 9.58 Lacunisphaera limnophila IG16b CP016094 GBK FAA FNA FFN TAB
MGLR01000000 44.72 1466 30 1569649 7.99 Chlamydiae bacterium RIFCSPHIGHO2_01_FULL_44_39 MGLR01000000 GBK FAA FNA FFN TAB
MGLV01000000 44.72 1470 30 1568548 7.45 Chlamydiae bacterium RIFCSPHIGHO2_12_FULL_44_59 MGLV01000000 GBK FAA FNA FFN TAB
MGLW01000000 48.45 1065 71 1258484 15.46 Chlamydiae bacterium RIFCSPHIGHO2_12_FULL_49_11 MGLW01000000 GBK FAA FNA FFN TAB
MGLY01000000 48.59 1166 94 1320387 30.52 Chlamydiae bacterium RIFCSPHIGHO2_12_FULL_49_9 MGLY01000000 GBK FAA FNA FFN TAB
MGLO01000000 49.34 993 32 1177368 11.23 Chlamydiae bacterium GWA2_50_15 MGLO01000000 GBK FAA FNA FFN TAB
MGLP01000000 48.94 966 52 1172283 18.56 Chlamydiae bacterium GWC2_50_10 MGLP01000000 GBK FAA FNA FFN TAB
MGLQ01000000 49.23 760 93 1019733 31.98 Chlamydiae bacterium GWF2_49_8 MGLQ01000000 GBK FAA FNA FFN TAB
FM872307 41.3 880 1 1044282 11.35 Chlamydia trachomatis B/TZ1A828/OT FM872307 GBK FAA FNA FFN TAB
MGLS01000000 44.66 1156 104 1342635 14.94 Chlamydiae bacterium RIFCSPHIGHO2_02_FULL_45_9 MGLS01000000 GBK FAA FNA FFN TAB
MGLU01000000 27.43 817 98 974360 13.68 Chlamydiae bacterium RIFCSPHIGHO2_12_FULL_27_8 MGLU01000000 GBK FAA FNA FFN TAB
MGLX01000000 48.91 1190 72 1397302 10.06 Chlamydiae bacterium RIFCSPHIGHO2_12_FULL_49_32 MGLX01000000 GBK FAA FNA FFN TAB
MGLT01000000 49.08 1187 69 1387015 10.55 Chlamydiae bacterium RIFCSPHIGHO2_02_FULL_49_29 MGLT01000000 GBK FAA FNA FFN TAB
MGLZ01000000 28.07 572 75 708526 30.63 Chlamydiae bacterium RIFCSPLOWO2_01_FULL_28_7 MGLZ01000000 GBK FAA FNA FFN TAB
MGMA01000000 44.74 1438 29 1537590 7.54 Chlamydiae bacterium RIFCSPLOWO2_01_FULL_44_52 MGMA01000000 GBK FAA FNA FFN TAB
MGMB01000000 44.7 1475 30 1575869 7.54 Chlamydiae bacterium RIFCSPLOWO2_02_FULL_45_22 MGMB01000000 GBK FAA FNA FFN TAB
MGMC01000000 48.99 1175 58 1413329 16.36 Chlamydiae bacterium RIFCSPLOWO2_02_FULL_49_12 MGMC01000000 GBK FAA FNA FFN TAB
MGMD01000000 44.75 1443 28 1542182 7.68 Chlamydiae bacterium RIFCSPLOWO2_12_FULL_45_20 MGMD01000000 GBK FAA FNA FFN TAB
MGME01000000 49.16 1224 46 1418742 11.43 Chlamydiae bacterium RIFCSPLOWO2_12_FULL_49_12 MGME01000000 GBK FAA FNA FFN TAB
FM872308 41.3 875 1 1044352 11.48 Chlamydia trachomatis B/Jali20/OT FM872308 GBK FAA FNA FFN TAB
CP018053 36.28 7 1 7503 12.55 Chlamydia trachomatis QH111L plasmid 1 CP018053 GBK FAA FNA FFN TAB
CP018052 41.28 888 1 1025839 9.67 Chlamydia trachomatis QH111L CP018052 GBK FAA FNA FFN TAB
MKSG01000000 32.42 2075 98 2529957 10.34 Chlamydia sp. 32-24 MKSG01000000 GBK FAA FNA FFN TAB
MKSK01000000 38.12 2327 8 2834110 12.61 Chlamydiales bacterium 38-26 MKSK01000000 GBK FAA FNA FFN TAB
CP019083 65.28 71 1 111833 22.82 Paludisphaera borealis PX4 plasmid 1 CP019083 GBK FAA FNA FFN TAB
CP019084 59.29 30 1 42519 32.74 Paludisphaera borealis PX4 plasmid 2 CP019084 GBK FAA FNA FFN TAB
CP019082 66.32 5619 1 7497544 14.67 Paludisphaera borealis PX4 CP019082 GBK FAA FNA FFN TAB
CP017641 55.9 6627 1 8920478 12.54 Fuerstia marisgermanicae NH11 CP017641 GBK FAA FNA FFN TAB
CP019633 46.2 2282 1 2951611 10.24 Sedimentisphaera cyanobacteriorum L21-RPul-D3 CP019633 GBK FAA FNA FFN TAB
CP019646 47.04 2931 1 3868357 10.46 Phycisphaerae bacterium SM-Chi-D1 CP019646 GBK FAA FNA FFN TAB
AM884177 41.33 874 1 1038863 9.76 Chlamydia trachomatis L2b/UCH-1/proctitis AM884177 GBK FAA FNA FFN TAB
CP019791 51.98 3493 1 4250973 11.0 Phycisphaerae bacterium ST-NAGAB-D1 CP019791 GBK FAA FNA FFN TAB
CP019793 31.75 8 1 7492 7.5 Chlamydia gallinacea JX-1 plasmid 1 CP019793 GBK FAA FNA FFN TAB
CP019792 37.93 885 1 1059522 12.25 Chlamydia gallinacea JX-1 CP019792 GBK FAA FNA FFN TAB
CP021023 46.31 2371 1 3192293 10.14 Sedimentisphaera salicampi ST-PulAB-D4 CP021023 GBK FAA FNA FFN TAB
CP021996 39.86 925 1 1144357 13.89 Chlamydia abortus GN6 CP021996 GBK FAA FNA FFN TAB
CP018477 57.34 4504 1 4810751 13.78 Thermogutta terrifontis R1 CP018477 GBK FAA FNA FFN TAB
CP023344 62.25 3763 1 4730447 10.15 Nibricoccus aquaticus HZ-65 CP023344 GBK FAA FNA FFN TAB
PAQS01000000 38.48 2460 49 3152361 9.56 Waddliaceae bacterium PAQS01000000 GBK FAA FNA FFN TAB
CP024454 32.89 6 1 7553 26.4 Chlamydia psittaci (Chlamydophila psittaci) GIMC 2003:Cps25SM plasmid 1 CP024454 GBK FAA FNA FFN TAB
CP024453 39.11 1019 1 1166857 8.71 Chlamydia psittaci (Chlamydophila psittaci) GIMC 2003:Cps25SM CP024453 GBK FAA FNA FFN TAB
AM884176 41.33 874 1 1038842 9.77 Chlamydia trachomatis L2/434/Bu AM884176 GBK FAA FNA FFN TAB
CP024456 32.88 6 1 7549 26.36 Chlamydia psittaci (Chlamydophila psittaci) GIMC 2004:CpsAP23 plasmid 1 CP024456 GBK FAA FNA FFN TAB
CP024455 39.06 1021 1 1172364 8.78 Chlamydia psittaci (Chlamydophila psittaci) GIMC 2004:CpsAP23 CP024455 GBK FAA FNA FFN TAB
CP024452 32.89 6 1 7553 26.4 Chlamydia psittaci (Chlamydophila psittaci) GIMC 2005:CpsCP1 plasmid 1 CP024452 GBK FAA FNA FFN TAB
CP024451 39.06 1022 1 1172381 8.8 Chlamydia psittaci (Chlamydophila psittaci) GIMC 2005:CpsCP1 CP024451 GBK FAA FNA FFN TAB
PFAD01000000 42.36 1581 21 1683436 6.55 Chlamydiae bacterium CG10_big_fil_rev_8_21_14_0_10_42_34 PFAD01000000 GBK FAA FNA FFN TAB
PFAC01000000 35.13 1720 62 1738633 9.63 Chlamydiae bacterium CG10_big_fil_rev_8_21_14_0_10_35_9 PFAC01000000 GBK FAA FNA FFN TAB
CP017730 41.3 901 1 1047716 9.5 Chlamydia trachomatis SQ32 CP017730 GBK FAA FNA FFN TAB
CP017731 41.3 901 1 1047716 9.5 Chlamydia trachomatis SQ29 CP017731 GBK FAA FNA FFN TAB
CP017732 41.3 911 1 1048530 8.86 Chlamydia trachomatis SQ20 CP017732 GBK FAA FNA FFN TAB
CP017733 41.3 911 1 1048538 8.86 Chlamydia trachomatis SQ24 CP017733 GBK FAA FNA FFN TAB
AE002164AE002268 40.57 1116 2 1234385 10.38 Chlamydia pneumoniae AR39 AE002164AE002268 GBK FAA FNA FFN TAB
CP017736 41.31 894 1 1042567 10.61 Chlamydia trachomatis SQ09 CP017736 GBK FAA FNA FFN TAB
CP017737 41.31 895 1 1042575 10.71 Chlamydia trachomatis SQ10 CP017737 GBK FAA FNA FFN TAB
CP017738 41.3 896 1 1042577 10.56 Chlamydia trachomatis SQ12 CP017738 GBK FAA FNA FFN TAB
CP017739 41.31 897 1 1042578 10.53 Chlamydia trachomatis SQ14 CP017739 GBK FAA FNA FFN TAB
CP017740 41.31 911 1 1048696 8.84 Chlamydia trachomatis SQ01 CP017740 GBK FAA FNA FFN TAB
CP017741 41.3 910 1 1048696 8.87 Chlamydia trachomatis SQ02 CP017741 GBK FAA FNA FFN TAB
CP017742 41.31 911 1 1048696 8.84 Chlamydia trachomatis SQ05 CP017742 GBK FAA FNA FFN TAB
CP017743 41.31 904 1 1043246 8.92 Chlamydia trachomatis SQ25 CP017743 GBK FAA FNA FFN TAB
CP017745 41.3 911 1 1048307 8.93 Chlamydia trachomatis SQ15 CP017745 GBK FAA FNA FFN TAB
CP017746 41.3 911 1 1048306 8.93 Chlamydia trachomatis SQ19 CP017746 GBK FAA FNA FFN TAB
CP001745 57.03 60 1 37010 6.84 Planctopirus limnophila DSM 3776 plasmid pPLIM01 CP001745 GBK FAA FNA FFN TAB
PEQL01000000 41.53 2540 39 3042961 12.09 Parachlamydia sp PEQL01000000 GBK FAA FNA FFN TAB
CP024084 39.87 1042 1 1144224 9.4 Chlamydia abortus GIMC 2006:CabB577 CP024084 GBK FAA FNA FFN TAB
CP027206 40.34 879 1 1072968 13.21 Chlamydia muridarum Nigg isolate CM021 CP027206 GBK FAA FNA FFN TAB
CP027208 40.34 899 1 1072952 8.56 Chlamydia muridarum Nigg isolate CM010 CP027208 GBK FAA FNA FFN TAB
CP027209 40.34 897 1 1072948 8.77 Chlamydia muridarum Nigg isolate CM009 CP027209 GBK FAA FNA FFN TAB
CP027210 40.34 898 1 1072952 8.67 Chlamydia muridarum Nigg isolate CM008 CP027210 GBK FAA FNA FFN TAB
CP027211 40.34 868 1 1072986 13.71 Chlamydia muridarum Nigg isolate CM007 CP027211 GBK FAA FNA FFN TAB
CP027212 40.34 894 1 1072952 9.11 Chlamydia muridarum Nigg isolate CM006 CP027212 GBK FAA FNA FFN TAB
CP027213 40.34 899 1 1072947 8.64 Chlamydia muridarum Nigg isolate CM005 CP027213 GBK FAA FNA FFN TAB
CP027215 40.34 898 1 1072945 8.66 Chlamydia muridarum Nigg isolate CM003 CP027215 GBK FAA FNA FFN TAB
CP001744 53.66 4198 1 5423075 15.39 Planctopirus limnophila DSM 3776 CP001744 GBK FAA FNA FFN TAB
CP027216 40.34 896 1 1072951 9.18 Chlamydia muridarum Nigg isolate CM002 CP027216 GBK FAA FNA FFN TAB
CP027217 40.34 889 1 1072960 10.69 Chlamydia muridarum Nigg isolate CM001 CP027217 GBK FAA FNA FFN TAB
CP027207 40.34 900 1 1072948 8.55 Chlamydia muridarum Nigg isolate CM012 CP027207 GBK FAA FNA FFN TAB
CP027214 40.34 896 1 1072947 9.36 Chlamydia muridarum Nigg isolate CM004 CP027214 GBK FAA FNA FFN TAB
CP027227 59.96 4164 1 5242681 9.66 Victivallales bacterium CCUG 44730 CP027227 GBK FAA FNA FFN TAB
CP025958 67.36 6994 1 8998893 19.36 Gemmata obscuriglobus DSM 5831 CP025958 GBK FAA FNA FFN TAB
PSRO01000000 36.58 1294 85 1379772 10.53 Chlamydiae bacterium PSRO01000000 GBK FAA FNA FFN TAB
QQBG01000000 43.73 756 28 780468 6.19 Candidatus Similichlamydia laticola Hat2 QQBG01000000 GBK FAA FNA FFN TAB
CP007217 40.34 887 1 1072952 9.16 Chlamydia muridarum Nigg3-28 CP007217 GBK FAA FNA FFN TAB
DLXJ01000000 44.35 1765 315 1643951 17.67 Parachlamydiales bacterium DLXJ01000000 GBK FAA FNA FFN TAB
CP002053 36.33 8 1 7493 6.47 Chlamydia trachomatis D-EC plasmid pCTDEC1 CP002053 GBK FAA FNA FFN TAB
DNHV01000000 49.18 1238 85 1379982 11.87 Parachlamydiales bacterium DNHV01000000 GBK FAA FNA FFN TAB
DPTR01000000 49.32 1075 184 1056156 14.81 Parachlamydiales bacterium DPTR01000000 GBK FAA FNA FFN TAB
DPTF01000000 49.45 1112 119 1214877 14.93 Parachlamydiales bacterium DPTF01000000 GBK FAA FNA FFN TAB
QMOL01000000 37.86 2030 239 2412545 12.09 Chlamydiae bacterium QMOL01000000 GBK FAA FNA FFN TAB
CP024736 55.39 2316 1 2772237 12.96 Akkermansia muciniphila AMDK-1 CP024736 GBK FAA FNA FFN TAB
CP024738 55.76 2239 1 2663833 15.45 Akkermansia muciniphila AMDK-3 CP024738 GBK FAA FNA FFN TAB
CP024740 55.76 2245 1 2664010 12.72 Akkermansia muciniphila AMDK-4 CP024740 GBK FAA FNA FFN TAB
CP024742 55.25 2315 1 2764211 13.17 Akkermansia muciniphila AMDK-2 CP024742 GBK FAA FNA FFN TAB
CP033060 32.95 7 1 7630 20.66 Chlamydia psittaci Ful127 plasmid 1 CP033060 GBK FAA FNA FFN TAB
CP033059 39.06 970 1 1171317 10.27 Chlamydia psittaci Ful127 CP033059 GBK FAA FNA FFN TAB
AE009440 40.58 1113 1 1225935 9.03 Chlamydia pneumoniae TW-183 AE009440 GBK FAA FNA FFN TAB
CP002052 41.31 870 1 1042522 9.24 Chlamydia trachomatis D-EC CP002052 GBK FAA FNA FFN TAB
CP025825 55.25 2332 1 2763834 17.35 Akkermansia muciniphila AMDK-10 CP025825 GBK FAA FNA FFN TAB
CP025826 55.26 2300 1 2764311 13.16 Akkermansia muciniphila AMDK-11 CP025826 GBK FAA FNA FFN TAB
CP025827 55.26 2302 1 2764297 12.88 Akkermansia muciniphila AMDK-12 CP025827 GBK FAA FNA FFN TAB
CP025829 55.25 2317 1 2764188 13.84 Akkermansia muciniphila AMDK-14 CP025829 GBK FAA FNA FFN TAB
CP025833 55.3 2327 1 2770124 13.27 Akkermansia muciniphila AMDK-18 CP025833 GBK FAA FNA FFN TAB
CP025834 55.32 2250 1 2724248 12.88 Akkermansia muciniphila AMDK-19 CP025834 GBK FAA FNA FFN TAB
CP025837 55.32 2239 1 2724161 15.39 Akkermansia muciniphila AMDK-22 CP025837 GBK FAA FNA FFN TAB
CP025831 55.3 2311 1 2770073 13.95 Akkermansia muciniphila AMDK-16 CP025831 GBK FAA FNA FFN TAB
CP025832 55.3 2311 1 2770146 13.8 Akkermansia muciniphila AMDK-17 CP025832 GBK FAA FNA FFN TAB
CP025823 55.3 2351 1 2799431 12.66 Akkermansia muciniphila AMDK-7 CP025823 GBK FAA FNA FFN TAB
CP001886 41.31 927 1 1042996 9.31 Chlamydia trachomatis E/150 CP001886 GBK FAA FNA FFN TAB
CP025824 55.39 2376 1 2824041 12.87 Akkermansia muciniphila AMDK-8 CP025824 GBK FAA FNA FFN TAB
CP025828 55.25 2327 1 2763965 16.94 Akkermansia muciniphila AMDK-13 CP025828 GBK FAA FNA FFN TAB
CP025830 55.3 2315 1 2770098 14.28 Akkermansia muciniphila AMDK-15 CP025830 GBK FAA FNA FFN TAB
CP025835 55.32 2250 1 2724186 13.46 Akkermansia muciniphila AMDK-20 CP025835 GBK FAA FNA FFN TAB
CP025836 55.32 2270 1 2724154 14.16 Akkermansia muciniphila AMDK-21 CP025836 GBK FAA FNA FFN TAB
CP033388 55.32 2414 1 2860407 12.08 Akkermansia muciniphila CBA5201 CP033388 GBK FAA FNA FFN TAB
CP036201 52.0 3474 1 4107983 11.24 Verrucomicrobia bacterium S94 CP036201 GBK FAA FNA FFN TAB
CP036293 55.74 2268 1 2801917 12.95 Akkermansia muciniphila 139 CP036293 GBK FAA FNA FFN TAB
LN867111 44.63 15 1 9136 17.18 Estrella lausannensis CRIB-30 plasmid 1 LN867111 GBK FAA FNA FFN TAB
CWGJ01000000 48.23 2202 29 2820195 13.08 Estrella lausannensis CRIB-30 CWGJ01000000 GBK FAA FNA FFN TAB
CP001887 41.31 920 1 1042810 9.07 Chlamydia trachomatis G/9768 CP001887 GBK FAA FNA FFN TAB
LN554883 39.86 933 1 1144467 8.73 Chlamydia abortus 1H LN554883 GBK FAA FNA FFN TAB
LN589721 39.86 933 1 1144467 8.73 Chlamydia abortus 1B_cevac LN589721 GBK FAA FNA FFN TAB
FLYO01000000 41.8 851 54 929815 8.17 Chlamydiales bacterium SCGC AG-110-M15 FLYO01000000 GBK FAA FNA FFN TAB
FLYF01000000 35.45 876 89 986924 8.51 Chlamydiales bacterium SCGC AB-751-O23 FLYF01000000 GBK FAA FNA FFN TAB
FLYP01000000 46.83 1235 96 1299661 14.3 Chlamydiales bacterium SCGC AG-110-P3 FLYP01000000 GBK FAA FNA FFN TAB
LT629973 57.65 2532 1 3074078 8.8 Akkermansia glycaniphila isolate APytT LT629973 GBK FAA FNA FFN TAB
LT934425 41.09 4035 1 4406153 18.67 Kuenenia stuttgartiensis isolate kuenenia_mbr1_ru-nijmegen LT934425 GBK FAA FNA FFN TAB
LT993739 31.12 8 1 7533 5.18 Chlamydia sp. H15-1957-10C LT993739 GBK FAA FNA FFN TAB
LT993738 37.46 984 1 1198609 10.14 Chlamydia sp. H15-1957-10C LT993738 GBK FAA FNA FFN TAB
LS992155 33.05 8 1 7559 6.3 Chlamydia sp. S15-834C isolate S15-834K LS992155 GBK FAA FNA FFN TAB
CP001888 41.31 927 1 1042354 9.26 Chlamydia trachomatis G/11222 CP001888 GBK FAA FNA FFN TAB
LS992154 37.5 973 1 1155104 9.97 Chlamydia sp. S15-834C isolate S15-834K LS992154 GBK FAA FNA FFN TAB
CAAJGQ000000000 36.16 1692 38 1830543 9.65 Rhabdochlamydia sp. T3358 CAAJGQ000000000 GBK FAA FNA FFN TAB
NZ_BASL00000000 34.78 2017 795 2722699 18.6 Candidatus Protochlamydia sp. R18 S13 NZ_BASL00000000 GBK FAA FNA FFN TAB
NZ_CCJF00000000 42.75 2451 5 2956128 15.15 Protochlamydia massiliensis NZ_CCJF00000000 GBK FAA FNA FFN TAB
NZ_BBPT00000000 38.71 2025 34 2307885 11.22 Parachlamydiaceae bacterium HS-T3 NZ_BBPT00000000 GBK FAA FNA FFN TAB
NZ_BAWW00000000 38.94 2409 72 2999361 12.34 Parachlamydia acanthamoebae Bn9 NZ_BAWW00000000 GBK FAA FNA FFN TAB
NZ_LM997411 41.48 2225 1 2476671 15.96 Methylacidiphilum fumariolicum SolV NZ_LM997411 GBK FAA FNA FFN TAB
NZ_FCNU00000000 42.05 2766 33 3423982 15.54 Parachlamydia sp. C2 NZ_FCNU00000000 GBK FAA FNA FFN TAB
NZ_LVEB00000000 43.82 1792 195 2111718 6.15 Waddlia chondrophila WSU 86-1044 NZ_LVEB00000000 GBK FAA FNA FFN TAB
NZ_BCPZ00000000 34.48 1817 402 2484573 18.74 Protochlamydia sp. W-9 NZ_BCPZ00000000 GBK FAA FNA FFN TAB
CP001889 41.31 919 1 1042875 9.1 Chlamydia trachomatis G/11074 CP001889 GBK FAA FNA FFN TAB
NZ_CP020535 41.3 900 1 1042393 9.53 Chlamydia trachomatis chxRP4F1 NZ_CP020535 GBK FAA FNA FFN TAB
NZ_CP020536 41.3 904 1 1042369 8.96 Chlamydia trachomatis chxRP4D10 NZ_CP020536 GBK FAA FNA FFN TAB
NZ_CP020537 41.3 899 1 1042376 9.64 Chlamydia trachomatis chxRP1H1 NZ_CP020537 GBK FAA FNA FFN TAB
NZ_CM008979 32.0 8 1 7522 7.79 Candidatus Chlamydia corallus G3/2742-324 plasmid 1 NZ_CM008979 GBK FAA FNA FFN TAB
NZ_NWQK00000000 39.33 988 6 1196452 12.31 Candidatus Chlamydia corallus G3/2742-324 NZ_NWQK00000000 GBK FAA FNA FFN TAB
NZ_PPEU00000000 39.54 843 169 981843 21.8 Candidatus Similichlamydia epinepheli GCCT14 NZ_PPEU00000000 GBK FAA FNA FFN TAB
NZ_CP035484 41.51 920 1 1054567 8.75 Chlamydia trachomatis tet9 NZ_CP035484 GBK FAA FNA FFN TAB
NZ_LT999999 42.24 915 1 1094002 10.07 Chlamydia suis isolate 4-29b NZ_LT999999 GBK FAA FNA FFN TAB
NZ_LT999998 42.08 901 1 1075010 9.31 Chlamydia suis isolate 3-25b NZ_LT999998 GBK FAA FNA FFN TAB
NZ_LS398099 41.58 904 1 1082175 9.19 Chlamydia suis isolate 9-1b NZ_LS398099 GBK FAA FNA FFN TAB
CP001890 41.31 926 1 1043025 9.13 Chlamydia trachomatis E/11023 CP001890 GBK FAA FNA FFN TAB
NZ_LS398098 42.17 913 1 1101914 9.77 Chlamydia suis isolate 5-27b NZ_LS398098 GBK FAA FNA FFN TAB
NZ_LT821324 36.86 8 1 7494 7.01 Chlamydia suis isolate SWA-2 NZ_LT821324 GBK FAA FNA FFN TAB
NZ_LT821323 42.08 902 1 1075789 9.5 Chlamydia suis isolate SWA-2 NZ_LT821323 GBK FAA FNA FFN TAB
NZ_CAAA00000000000 38.29 942 2 1146546 10.78 Chlamydia sp. RSHA NZ_CAAA00000000000 GBK FAA FNA FFN TAB
CP001929 37.61 22 1 15593 17.85 Waddlia chondrophila WSU 86-1044 plasmid pWc CP001929 GBK FAA FNA FFN TAB
CP001928 43.78 1934 1 2116312 5.3 Waddlia chondrophila WSU 86-1044 CP001928 GBK FAA FNA FFN TAB
CP001930 41.31 921 1 1042811 8.93 Chlamydia trachomatis G/9301 CP001930 GBK FAA FNA FFN TAB
CP002055 36.33 8 1 7493 6.47 Chlamydia trachomatis D-LC plasmid pCTDLC1 CP002055 GBK FAA FNA FFN TAB
AE015926 33.69 7 1 7966 22.19 Chlamydia caviae GPIC plasmid pCpGP1 AE015926 GBK FAA FNA FFN TAB
CP002054 41.31 870 1 1042520 9.23 Chlamydia trachomatis D-LC CP002054 GBK FAA FNA FFN TAB
CP002546 56.45 4750 1 6006602 14.24 Rubinisphaera brasiliensis DSM 5305 CP002546 GBK FAA FNA FFN TAB
ACZE01000000 38.97 2809 95 2971261 9.74 Parachlamydia acanthamoebae Hall's coccus ACZE01000000 GBK FAA FNA FFN TAB
CP002354 67.0 32 1 56340 25.78 Isosphaera pallida ATCC 43644 plasmid pISOP01 CP002354 GBK FAA FNA FFN TAB
CP002353 62.44 3690 1 5472964 15.31 Isosphaera pallida ATCC 43644 CP002353 GBK FAA FNA FFN TAB
CP002550 32.89 8 1 7553 13.81 Chlamydia psittaci 6BC plasmid p6BC CP002550 GBK FAA FNA FFN TAB
CP002549 39.06 967 1 1171660 9.89 Chlamydia psittaci 6BC CP002549 GBK FAA FNA FFN TAB
BX119912 55.4 7325 1 7145576 2.71 Rhodopirellula baltica SH 1 BX119912 GBK FAA FNA FFN TAB
CP002608 41.08 988 1 1106197 7.33 Chlamydia pecorum E58 CP002608 GBK FAA FNA FFN TAB
CP002587 32.89 7 1 7553 11.7 Chlamydia psittaci 6BC plasmid pCps6BC CP002587 GBK FAA FNA FFN TAB
AE015925 39.22 998 1 1173390 10.19 Chlamydia caviae GPIC AE015925 GBK FAA FNA FFN TAB
CP002586 39.06 1002 1 1171667 9.87 Chlamydia psittaci 6BC CP002586 GBK FAA FNA FFN TAB
FN652779 41.31 875 1 1042839 10.25 Chlamydia trachomatis Sweden2 FN652779 GBK FAA FNA FFN TAB
CP002024 41.33 954 1 1038313 9.2 Chlamydia trachomatis L2c CP002024 GBK FAA FNA FFN TAB
CP002402 36.23 8 1 7480 6.19 Chlamydia trachomatis A2497 plasmid Plasmid0001 CP002402 GBK FAA FNA FFN TAB
CP002401 41.3 981 1 1044326 7.73 Chlamydia trachomatis A2497 CP002401 GBK FAA FNA FFN TAB
FR872581 38.28 137 1 132038 13.47 Simkania negevensis Z plasmid pSn FR872581 GBK FAA FNA FFN TAB
FR872582 41.78 2381 1 2496337 8.37 Simkania negevensis Z main FR872582 GBK FAA FNA FFN TAB
CP003365 60.11 30 1 54731 14.57 Singulisphaera acidiphila DSM 18658 plasmid pSINAC01 CP003365 GBK FAA FNA FFN TAB
CP003366 59.86 54 1 39149 22.7 Singulisphaera acidiphila DSM 18658 plasmid pSINAC02 CP003366 GBK FAA FNA FFN TAB
CP003367 58.99 31 1 32131 29.89 Singulisphaera acidiphila DSM 18658 plasmid pSINAC03 CP003367 GBK FAA FNA FFN TAB
AE001273 41.31 894 1 1042519 8.77 Chlamydia trachomatis D/UW-3/CX AE001273 GBK FAA FNA FFN TAB
CP003364 62.27 7136 1 9629675 17.8 Singulisphaera acidiphila DSM 18658 CP003364 GBK FAA FNA FFN TAB
CP007054 54.44 91 1 99831 35.98 Opitutaceae bacterium TAV5 plasmid CP007054 GBK FAA FNA FFN TAB
CP007053 63.57 5980 1 7317842 12.31 Opitutaceae bacterium TAV5 CP007053 GBK FAA FNA FFN TAB
FR872580 39.03 2788 1 3072383 9.75 Parachlamydia acanthamoebae UV-7 FR872580 GBK FAA FNA FFN TAB
CP002804 39.05 978 1 1169374 9.24 Chlamydia psittaci C19/98 CP002804 GBK FAA FNA FFN TAB
CP002805 39.06 975 1 1172197 9.87 Chlamydia psittaci 01DC11 CP002805 GBK FAA FNA FFN TAB
CP002806 39.06 978 1 1172182 9.33 Chlamydia psittaci 02DC15 CP002806 GBK FAA FNA FFN TAB
CP002807 39.05 973 1 1172032 10.34 Chlamydia psittaci 08DC60 CP002807 GBK FAA FNA FFN TAB
AP012339 69.99 81 1 81157 10.57 Phycisphaera mikurensis NBRC 102666 plasmid pPSMK1 AP012339 GBK FAA FNA FFN TAB
AP012338 73.29 3203 1 3803225 10.96 Phycisphaera mikurensis NBRC 102666 AP012338 GBK FAA FNA FFN TAB
AE001363 40.58 1052 1 1230230 10.94 Chlamydia pneumoniae CWL029 AE001363 GBK FAA FNA FFN TAB
FM872306 41.3 879 1 1044325 11.48 Chlamydia trachomatis A2497 serovar A FM872306 GBK FAA FNA FFN TAB
CP003812 32.82 8 1 7487 6.0 Chlamydia psittaci 84/55 plasmid pcp8455 CP003812 GBK FAA FNA FFN TAB
CP003790 39.06 1119 1 1172064 10.27 Chlamydia psittaci 84/55 CP003790 GBK FAA FNA FFN TAB
CP003791 39.08 1042 1 1147152 9.85 Chlamydia psittaci GR9 CP003791 GBK FAA FNA FFN TAB
CP003815 32.93 7 1 7491 29.56 Chlamydia psittaci MN plasmid pcpMN CP003815 GBK FAA FNA FFN TAB
CP003792 39.06 1034 1 1168490 9.57 Chlamydia psittaci MN CP003792 GBK FAA FNA FFN TAB
CP003817 32.91 8 1 7553 7.61 Chlamydia psittaci VS225 plasmid pcpVS225 CP003817 GBK FAA FNA FFN TAB
CP003793 39.02 1108 1 1157385 9.77 Chlamydia psittaci VS225 CP003793 GBK FAA FNA FFN TAB
CP003819 32.94 8 1 7553 6.38 Chlamydia psittaci WS/RT/E30 plasmid pcpWSRTE30 CP003819 GBK FAA FNA FFN TAB
CP003794 39.03 1044 1 1140789 10.1 Chlamydia psittaci WS/RT/E30 CP003794 GBK FAA FNA FFN TAB
AP006862 33.91 8 1 7552 3.07 Chlamydia felis Fe/C-56 Fe/C-56 plasmid pCfe1 AP006862 GBK FAA FNA FFN TAB
CP003814 32.89 8 1 7553 7.65 Chlamydia psittaci M56 plasmid pcpM56 CP003814 GBK FAA FNA FFN TAB
CP003795 38.79 1041 1 1161385 9.77 Chlamydia psittaci M56 CP003795 GBK FAA FNA FFN TAB
CP003818 32.93 8 1 7553 7.65 Chlamydia psittaci WC plasmid pcpWC CP003818 GBK FAA FNA FFN TAB
CP003796 39.08 1046 1 1172265 9.47 Chlamydia psittaci WC CP003796 GBK FAA FNA FFN TAB
CP003813 32.88 8 1 7552 7.6 Chlamydia psittaci CP3 plasmid pcpCP3 CP003813 GBK FAA FNA FFN TAB
CP003797 39.06 1116 1 1168150 9.92 Chlamydia psittaci CP3 CP003797 GBK FAA FNA FFN TAB
CP003816 32.8 8 1 7552 7.6 Chlamydia psittaci NJ1 plasmid pcpNJ1 CP003816 GBK FAA FNA FFN TAB
CP003798 38.96 1044 1 1161434 9.19 Chlamydia psittaci NJ1 CP003798 GBK FAA FNA FFN TAB
HE601801 41.31 876 1 1042903 10.13 Chlamydia trachomatis E/SW3 HE601801 GBK FAA FNA FFN TAB
HE601804 41.31 873 1 1042736 10.29 Chlamydia trachomatis F/SW4 HE601804 GBK FAA FNA FFN TAB
AP006861 39.38 1005 1 1166239 8.13 Chlamydia felis Fe/C-56 Fe/C-56 AP006861 GBK FAA FNA FFN TAB
HE601805 41.31 875 1 1042743 10.13 Chlamydia trachomatis F/SW5 HE601805 GBK FAA FNA FFN TAB
HE603209 36.26 8 1 7502 7.02 Chlamydia trachomatis A/363 plasmid pA363 sequence HE603209 GBK FAA FNA FFN TAB
HE601796 41.3 900 1 1044026 8.94 Chlamydia trachomatis A/363 HE601796 GBK FAA FNA FFN TAB
HE603211 36.26 8 1 7502 7.02 Chlamydia trachomatis A/7249 plasmid pA7249 sequence HE603211 GBK FAA FNA FFN TAB
HE601797 41.3 898 1 1044377 9.03 Chlamydia trachomatis A/7249 HE601797 GBK FAA FNA FFN TAB
HE603212 36.24 8 1 7502 7.02 Chlamydia trachomatis E/Bour plasmid pBour sequence HE603212 GBK FAA FNA FFN TAB
HE601870 41.31 896 1 1042589 8.87 Chlamydia trachomatis E/Bour HE601870 GBK FAA FNA FFN TAB
HE603236 36.32 8 1 7500 7.16 Chlamydia trachomatis Ia/SotonIa1 plasmid pSotonIa1 sequence HE603236 GBK FAA FNA FFN TAB
HE601808 41.31 894 1 1042630 8.95 Chlamydia trachomatis Ia/SotonIa1 HE601808 GBK FAA FNA FFN TAB
HE603237 36.32 8 1 7500 7.16 Chlamydia trachomatis Ia/SotonIa3 plasmid pSotonIa3 sequence HE603237 GBK FAA FNA FFN TAB

Help

The phylogeny was build based on concatenated single copy orthologs with FastTree (default parameters). Nodes with black dots have support values lower than 1. The percentage of non-coding DNA of fragmented genomes was calculated based on data from contigs larger than 10 kilo bases. The completeness and contamination of each genome were estimated with checkM based on the identification of 104 "universal" marker genes.

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