Chlamydiae Database
A comparative genomics database of the Planctomycetes-Verrucomicrobia-Chlamydiae superphylum
Content of the database & main features
- 277 PVC genomes (see the phylogeny)
- Orthologous proteins identified with OrthoFinder
- Detailed annotation of proteins based on
- KEGG (Kegg orthologs)
- COG (clusters of orthologous groups)
- STRING (protein-protein interactions)
- PRIAM (enzymes)
- TCDB (curated transporters annotation)
- SwissProt (manually annotated proteins)
- InterproScan (domains and signatures)
- DOOR (operons)
- Precomputed homology searches with RefSeq and SwissProt databases for each protein
- Precomputed phylogenetic reconstructions of orthologous groups including the closest RefSeq homologs
- Pfam and COG phylogenetic profiles allowing to identify chlamydial domains/proteins rarely found in other prokaryotes (see for example PF01823)
- Identification of conserved gene neighborhood among distantly related Chlamydiae and PVC (see for example the paper from Dandekar et al. for the rationale behind this)
- Multiple tools allowing comparative analyses of Chlamydiae genomes
- References to scientific publications collected from multiple sources
Latest News
December 02, 2019
Updated references to litterature (reported in the "Pubmed" tab available on each locus page) using data from STRING version 11.
November 26, 2019
New feature: Proteins associated to the same Pubmed entry (data from PaperBlast) can be retrieved from the "PubMed" tab on each locus page. See for example papers associated to the chaperone Scc2/CT576 and the 9 C. trachomatis proteins associated to the publication from Fields et al. (Analysis of putative Chlamydia trachomatis chaperones Scc2 and Scc3 and their use in the identification of type III secretion substrates, J Bacteriol. 2005).
October 22, 2019
Updated references to litterature (reported in the "Pubmed" tab available on each locus page) using the PaperBlast database from September 25 2019.
June 2019Release 2.0 of the database with 277 PVC genomes.
Accession | GC | N proteins | N contigs | Size | Percent non coding | Organism | Browse Online | gbk | faa | fna | ffn | tab |
---|---|---|---|---|---|---|---|---|---|---|---|---|
AE002162 | 35.72 | 7 | 1 | 7501 | 21.65 | Chlamydia muridarum Nigg plasmid pMoPn | AE002162 | GBK | FAA | FNA | FFN | TAB |
BA000008 | 40.58 | 1069 | 1 | 1226565 | 9.91 | Chlamydia pneumoniae J138 genomic | BA000008 | GBK | FAA | FNA | FFN | TAB |
HE601809 | 41.31 | 894 | 1 | 1042783 | 8.95 | Chlamydia trachomatis Ia/SotonIa3 | HE601809 | GBK | FAA | FNA | FFN | TAB |
HE601950 | 41.33 | 892 | 1 | 1039261 | 8.98 | Chlamydia trachomatis L1/440/LN | HE601950 | GBK | FAA | FNA | FFN | TAB |
HE603218 | 36.21 | 8 | 1 | 7500 | 7.0 | Chlamydia trachomatis L1/115 plasmid pL1115 sequence | HE603218 | GBK | FAA | FNA | FFN | TAB |
HE601952 | 41.33 | 889 | 1 | 1039084 | 9.02 | Chlamydia trachomatis L1/115 | HE601952 | GBK | FAA | FNA | FFN | TAB |
HE603220 | 36.23 | 8 | 1 | 7500 | 7.0 | Chlamydia trachomatis L1/224 plasmid pL1224 sequence | HE603220 | GBK | FAA | FNA | FFN | TAB |
HE601953 | 41.33 | 890 | 1 | 1038819 | 8.99 | Chlamydia trachomatis L1/224 | HE601953 | GBK | FAA | FNA | FFN | TAB |
HE601954 | 41.33 | 890 | 1 | 1038839 | 9.03 | Chlamydia trachomatis L2/25667R | HE601954 | GBK | FAA | FNA | FFN | TAB |
HE603222 | 36.23 | 8 | 1 | 7500 | 7.0 | Chlamydia trachomatis L2b/8200/07 plasmid pL2b820007 sequence | HE603222 | GBK | FAA | FNA | FFN | TAB |
HE601795 | 41.33 | 890 | 1 | 1038864 | 8.98 | Chlamydia trachomatis L2b/8200/07 | HE601795 | GBK | FAA | FNA | FFN | TAB |
HE603227 | 36.2 | 8 | 1 | 7473 | 6.66 | Chlamydia trachomatis L2b/UCH-2 plasmid pL2bUCH2 sequence | HE603227 | GBK | FAA | FNA | FFN | TAB |
BX908798 | 34.72 | 2031 | 1 | 2414465 | 17.09 | Parachlamydia-related symbiont UWE25 | BX908798 | GBK | FAA | FNA | FFN | TAB |
HE601956 | 41.33 | 890 | 1 | 1038864 | 8.98 | Chlamydia trachomatis L2b/UCH-2 | HE601956 | GBK | FAA | FNA | FFN | TAB |
HE603221 | 36.23 | 8 | 1 | 7500 | 7.0 | Chlamydia trachomatis L2b/795 L2b795 plasmid 1 | HE603221 | GBK | FAA | FNA | FFN | TAB |
HE601949 | 41.33 | 890 | 1 | 1038720 | 9.0 | Chlamydia trachomatis L2b/795 | HE601949 | GBK | FAA | FNA | FFN | TAB |
HE603228 | 36.32 | 7 | 1 | 7415 | 18.31 | Chlamydia trachomatis L3/404/LN plasmid pL3404 sequence | HE603228 | GBK | FAA | FNA | FFN | TAB |
HE601955 | 41.33 | 888 | 1 | 1039257 | 9.02 | Chlamydia trachomatis L3/404/LN | HE601955 | GBK | FAA | FNA | FFN | TAB |
CP002744 | 39.06 | 1017 | 1 | 1163362 | 12.36 | Chlamydia psittaci Mat116 | CP002744 | GBK | FAA | FNA | FFN | TAB |
CP003964 | 36.23 | 7 | 1 | 7499 | 20.07 | Chlamydia trachomatis L2/434/Bu(i) plasmid pL2/434/Bu(i) | CP003964 | GBK | FAA | FNA | FFN | TAB |
CP003963 | 41.33 | 903 | 1 | 1038842 | 9.75 | Chlamydia trachomatis L2/434/Bu(i) | CP003963 | GBK | FAA | FNA | FFN | TAB |
CP003966 | 36.23 | 7 | 1 | 7499 | 20.07 | Chlamydia trachomatis L2/434/Bu(f) plasmid pL2/434/Bu(f) | CP003966 | GBK | FAA | FNA | FFN | TAB |
CP003965 | 41.33 | 903 | 1 | 1038842 | 9.75 | Chlamydia trachomatis L2/434/Bu(f) | CP003965 | GBK | FAA | FNA | FFN | TAB |
CP000052 | 36.27 | 8 | 1 | 7510 | 7.96 | Chlamydia trachomatis A/HAR-13 plasmid pCTA | CP000052 | GBK | FAA | FNA | FFN | TAB |
ATNB01000000 | 38.65 | 1253 | 153 | 1213046 | 9.26 | Chlamydia ibidis 10_1398_11 | ATNB01000000 | GBK | FAA | FNA | FFN | TAB |
CP002671 | 41.32 | 924 | 1 | 1046087 | 9.67 | Chlamydia trachomatis RC-F/69 | CP002671 | GBK | FAA | FNA | FFN | TAB |
CP002672 | 41.33 | 925 | 1 | 1038817 | 9.11 | Chlamydia trachomatis RC-L2(s)/46 | CP002672 | GBK | FAA | FNA | FFN | TAB |
CP002673 | 41.51 | 954 | 1 | 1083893 | 9.97 | Chlamydia trachomatis RC-F(s)/852 | CP002673 | GBK | FAA | FNA | FFN | TAB |
CP002674 | 41.33 | 926 | 1 | 1038797 | 8.87 | Chlamydia trachomatis RC-J/943 | CP002674 | GBK | FAA | FNA | FFN | TAB |
CP002675 | 41.33 | 920 | 1 | 1038792 | 9.01 | Chlamydia trachomatis RC-J/953 | CP002675 | GBK | FAA | FNA | FFN | TAB |
CP002676 | 41.31 | 919 | 1 | 1046171 | 9.93 | Chlamydia trachomatis RC-L2(s)/3 | CP002676 | GBK | FAA | FNA | FFN | TAB |
CP002677 | 41.51 | 951 | 1 | 1083842 | 10.0 | Chlamydia trachomatis RC-F(s)/342 | CP002677 | GBK | FAA | FNA | FFN | TAB |
CP002678 | 41.49 | 935 | 1 | 1061854 | 9.9 | Chlamydia trachomatis RC-J(s)/122 | CP002678 | GBK | FAA | FNA | FFN | TAB |
CP002679 | 41.33 | 926 | 1 | 1038839 | 8.91 | Chlamydia trachomatis RC-J/966 | CP002679 | GBK | FAA | FNA | FFN | TAB |
CP000051 | 41.3 | 911 | 1 | 1044459 | 8.72 | Chlamydia trachomatis A/HAR-13 | CP000051 | GBK | FAA | FNA | FFN | TAB |
CP002680 | 41.51 | 956 | 1 | 1080953 | 9.04 | Chlamydia trachomatis J/6276tet1 | CP002680 | GBK | FAA | FNA | FFN | TAB |
CP002681 | 41.33 | 925 | 1 | 1038442 | 9.01 | Chlamydia trachomatis RC-J/971 | CP002681 | GBK | FAA | FNA | FFN | TAB |
CP002682 | 41.33 | 927 | 1 | 1038870 | 8.94 | Chlamydia trachomatis RC-L2/55 | CP002682 | GBK | FAA | FNA | FFN | TAB |
APJW01000000 | 38.32 | 1018 | 4 | 1146066 | 9.42 | Chlamydia ibidis 10-1398/6 | APJW01000000 | GBK | FAA | FNA | FFN | TAB |
CP004033 | 41.13 | 921 | 1 | 1104552 | 7.39 | Chlamydia pecorum PV3056/3 | CP004033 | GBK | FAA | FNA | FFN | TAB |
CP004034 | 41.11 | 925 | 1 | 1106534 | 7.18 | Chlamydia pecorum W73 | CP004034 | GBK | FAA | FNA | FFN | TAB |
CP004035 | 41.1 | 925 | 1 | 1106409 | 7.14 | Chlamydia pecorum P787 | CP004035 | GBK | FAA | FNA | FFN | TAB |
CP015841 | 31.75 | 8 | 1 | 7619 | 19.04 | Chlamydia gallinacea 08-1274/3 plasmid p1274 | CP015841 | GBK | FAA | FNA | FFN | TAB |
CP015840 | 37.94 | 892 | 1 | 1059583 | 9.34 | Chlamydia gallinacea 08-1274/3 | CP015840 | GBK | FAA | FNA | FFN | TAB |
CP006946 | 36.25 | 8 | 1 | 7501 | 7.97 | Chlamydia trachomatis C/TW-3 plasmid unnamed | CP006946 | GBK | FAA | FNA | FFN | TAB |
CP000975 | 45.48 | 2472 | 1 | 2287145 | 8.79 | Methylacidiphilum infernorum V4 | CP000975 | GBK | FAA | FNA | FFN | TAB |
CP006945 | 41.3 | 920 | 1 | 1043554 | 9.92 | Chlamydia trachomatis C/TW-3 | CP006945 | GBK | FAA | FNA | FFN | TAB |
CP006572 | 31.22 | 7 | 1 | 7099 | 19.5 | Chlamydia avium 10DC88 plasmid p10DC88 | CP006572 | GBK | FAA | FNA | FFN | TAB |
CP006571 | 36.92 | 940 | 1 | 1041170 | 9.17 | Chlamydia avium 10DC88 | CP006571 | GBK | FAA | FNA | FFN | TAB |
CP006671 | 41.31 | 923 | 1 | 1042588 | 9.48 | Chlamydia trachomatis F/1-93 | CP006671 | GBK | FAA | FNA | FFN | TAB |
CP006673 | 41.31 | 930 | 1 | 1042767 | 8.44 | Chlamydia trachomatis F/6-94 | CP006673 | GBK | FAA | FNA | FFN | TAB |
CP006674 | 41.31 | 928 | 1 | 1042853 | 8.67 | Chlamydia trachomatis F/11-96 | CP006674 | GBK | FAA | FNA | FFN | TAB |
CP006676 | 41.31 | 931 | 1 | 1042752 | 8.37 | Chlamydia trachomatis D/13-96 | CP006676 | GBK | FAA | FNA | FFN | TAB |
CP006680 | 41.31 | 924 | 1 | 1043207 | 8.53 | Chlamydia trachomatis J/31-98 | CP006680 | GBK | FAA | FNA | FFN | TAB |
AP017978 | 37.83 | 172 | 1 | 231307 | 20.36 | Neochlamydia sp. S13 plasmid pS13 | AP017978 | GBK | FAA | FNA | FFN | TAB |
AP017977 | 38.04 | 2002 | 1 | 2586667 | 21.87 | Neochlamydia sp. S13 | AP017977 | GBK | FAA | FNA | FFN | TAB |
CP001032 | 65.34 | 4612 | 1 | 5957605 | 11.28 | Opitutus terrae PB90-1 | CP001032 | GBK | FAA | FNA | FFN | TAB |
CP007276 | 40.34 | 888 | 1 | 1072952 | 9.14 | Chlamydia muridarum Nigg 2 MCR | CP007276 | GBK | FAA | FNA | FFN | TAB |
CCEJ010000000 | 38.24 | 2418 | 23 | 2969604 | 9.9 | Criblamydia sequanensis CRIB-18 | CCEJ010000000 | GBK | FAA | FNA | FFN | TAB |
CP009608 | 40.34 | 887 | 1 | 1072952 | 8.75 | Chlamydia muridarum Nigg3 | CP009608 | GBK | FAA | FNA | FFN | TAB |
CP009609 | 40.34 | 891 | 1 | 1072952 | 8.66 | Chlamydia muridarum Nigg3 | CP009609 | GBK | FAA | FNA | FFN | TAB |
CP009760 | 40.34 | 894 | 1 | 1072951 | 8.52 | Chlamydia muridarum Nigg3 | CP009760 | GBK | FAA | FNA | FFN | TAB |
JSAM01000000 | 39.04 | 2755 | 162 | 3008885 | 11.54 | Parachlamydia acanthamoebae OEW1 | JSAM01000000 | GBK | FAA | FNA | FFN | TAB |
JSAN01000000 | 34.82 | 2149 | 178 | 2397675 | 17.6 | Candidatus Protochlamydia amoebophila EI2 | JSAN01000000 | GBK | FAA | FNA | FFN | TAB |
JRXI01000000 | 38.02 | 2344 | 254 | 2546323 | 18.79 | Neochlamydia sp. TUME1 | JRXI01000000 | GBK | FAA | FNA | FFN | TAB |
JSDQ01000000 | 38.09 | 2173 | 112 | 2530677 | 20.25 | Neochlamydia sp. EPS4 | JSDQ01000000 | GBK | FAA | FNA | FFN | TAB |
CP006974 | 40.34 | 924 | 1 | 1072951 | 8.26 | Chlamydia muridarum Nigg3 CMUT3-5 Nigg | CP006974 | GBK | FAA | FNA | FFN | TAB |
CP001071 | 55.76 | 2138 | 1 | 2664102 | 12.23 | Akkermansia muciniphila ATCC BAA-835 | CP001071 | GBK | FAA | FNA | FFN | TAB |
CP006975 | 40.34 | 924 | 1 | 1072952 | 8.26 | Chlamydia muridarum Nigg CM972 | CP006975 | GBK | FAA | FNA | FFN | TAB |
LN554882 | 39.86 | 933 | 1 | 1144467 | 8.73 | Chlamydia abortus AB7 | LN554882 | GBK | FAA | FNA | FFN | TAB |
CP009924 | 36.23 | 8 | 1 | 7500 | 8.0 | Chlamydia trachomatis L2b/CS19/08 plasmid 1 | CP009924 | GBK | FAA | FNA | FFN | TAB |
CP009923 | 41.33 | 902 | 1 | 1038864 | 9.07 | Chlamydia trachomatis L2b/CS19/08 | CP009923 | GBK | FAA | FNA | FFN | TAB |
CP009926 | 36.23 | 8 | 1 | 7500 | 8.0 | Chlamydia trachomatis L2b/CS784/08 plasmid 1 | CP009926 | GBK | FAA | FNA | FFN | TAB |
CP009925 | 41.33 | 902 | 1 | 1038864 | 9.07 | Chlamydia trachomatis L2b/CS784/08 | CP009925 | GBK | FAA | FNA | FFN | TAB |
CP011265 | 61.28 | 2640 | 1 | 4001000 | 23.51 | Verrucomicrobia bacterium IMCC26134 | CP011265 | GBK | FAA | FNA | FFN | TAB |
LN846980 | 40.58 | 1123 | 1 | 1228125 | 8.54 | Chlamydia pneumoniae | LN846980 | GBK | FAA | FNA | FFN | TAB |
LN847221 | 40.58 | 1129 | 1 | 1228523 | 8.53 | Chlamydia pneumoniae | LN847221 | GBK | FAA | FNA | FFN | TAB |
LN847000 | 40.58 | 1133 | 1 | 1228579 | 8.48 | Chlamydia pneumoniae | LN847000 | GBK | FAA | FNA | FFN | TAB |
CP001714 | 33.03 | 8 | 1 | 7530 | 6.06 | Chlamydia pneumoniae LPCoLN plasmid | CP001714 | GBK | FAA | FNA | FFN | TAB |
LN847257 | 40.58 | 1128 | 1 | 1228576 | 8.53 | Chlamydia pneumoniae | LN847257 | GBK | FAA | FNA | FFN | TAB |
LN846996 | 40.58 | 1123 | 1 | 1228123 | 8.59 | Chlamydia pneumoniae | LN846996 | GBK | FAA | FNA | FFN | TAB |
LN846995 | 40.58 | 1128 | 1 | 1229887 | 8.55 | Chlamydia pneumoniae | LN846995 | GBK | FAA | FNA | FFN | TAB |
LN847241 | 40.58 | 1131 | 1 | 1228126 | 8.54 | Chlamydia pneumoniae | LN847241 | GBK | FAA | FNA | FFN | TAB |
CP010904 | 63.31 | 2420 | 1 | 2949723 | 10.49 | Kiritimatiella glycovorans L21-Fru-AB | CP010904 | GBK | FAA | FNA | FFN | TAB |
CP007132 | 36.33 | 8 | 1 | 7493 | 7.99 | Chlamydia trachomatis D/CS637/11 plasmid unnamed | CP007132 | GBK | FAA | FNA | FFN | TAB |
CP007131 | 41.31 | 925 | 1 | 1042680 | 9.0 | Chlamydia trachomatis D/CS637/11 | CP007131 | GBK | FAA | FNA | FFN | TAB |
CP010568 | 36.23 | 8 | 1 | 7502 | 8.02 | Chlamydia trachomatis E/CS1025/11 plasmid 1 | CP010568 | GBK | FAA | FNA | FFN | TAB |
CP010567 | 41.31 | 904 | 1 | 1043034 | 9.06 | Chlamydia trachomatis E/CS1025/11 | CP010567 | GBK | FAA | FNA | FFN | TAB |
CP010570 | 36.23 | 8 | 1 | 7493 | 8.03 | Chlamydia trachomatis F/CS847/08 plasmid 1 | CP010570 | GBK | FAA | FNA | FFN | TAB |
CP001713 | 40.55 | 1097 | 1 | 1241020 | 9.94 | Chlamydia pneumoniae LPCoLN | CP001713 | GBK | FAA | FNA | FFN | TAB |
CP010569 | 41.31 | 903 | 1 | 1043060 | 9.1 | Chlamydia trachomatis F/CS847/08 | CP010569 | GBK | FAA | FNA | FFN | TAB |
CP010572 | 36.3 | 8 | 1 | 7471 | 7.76 | Chlamydia trachomatis Ia/CS190/96 plasmid 1 | CP010572 | GBK | FAA | FNA | FFN | TAB |
CP010571 | 41.31 | 905 | 1 | 1042034 | 8.89 | Chlamydia trachomatis Ia/CS190/96 | CP010571 | GBK | FAA | FNA | FFN | TAB |
LJUH01000000 | 26.23 | 986 | 67 | 1126604 | 9.41 | Chlamydiae bacterium SM23_39 | LJUH01000000 | GBK | FAA | FNA | FFN | TAB |
CP012665 | 47.73 | 817 | 1 | 915884 | 15.48 | Xiphinematobacter sp. Idaho Grape | CP012665 | GBK | FAA | FNA | FFN | TAB |
LN879503 | 37.21 | 160 | 1 | 145285 | 19.45 | Candidatus Protochlamydia naegleriophila KNic plasmid 1 | LN879503 | GBK | FAA | FNA | FFN | TAB |
LN879502 | 42.7 | 2415 | 1 | 2885090 | 14.89 | Candidatus Protochlamydia naegleriophila KNic | LN879502 | GBK | FAA | FNA | FFN | TAB |
CP011270 | 65.56 | 6521 | 1 | 8442773 | 17.28 | Planctomyces sp. SH-PL14 | CP011270 | GBK | FAA | FNA | FFN | TAB |
CP011271 | 64.22 | 7704 | 1 | 9045424 | 13.49 | Gemmata sp. SH-PL17 | CP011271 | GBK | FAA | FNA | FFN | TAB |
CP011272 | 54.25 | 5328 | 1 | 6534136 | 10.28 | Pirellula sp. SH-Sr6A | CP011272 | GBK | FAA | FNA | FFN | TAB |
CP001848 | 57.46 | 4717 | 1 | 6196199 | 14.11 | Pirellula staleyi DSM 6068 | CP001848 | GBK | FAA | FNA | FFN | TAB |
CP011274 | 69.02 | 77 | 1 | 97874 | 14.37 | Planctomyces sp. SH-PL62 plasmid pPL62-1 | CP011274 | GBK | FAA | FNA | FFN | TAB |
CP011275 | 67.74 | 65 | 1 | 86054 | 15.93 | Planctomyces sp. SH-PL62 plasmid pPL62-2 | CP011275 | GBK | FAA | FNA | FFN | TAB |
CP011276 | 69.41 | 58 | 1 | 81115 | 13.15 | Planctomyces sp. SH-PL62 plasmid pPL62-3 | CP011276 | GBK | FAA | FNA | FFN | TAB |
CP011277 | 66.67 | 18 | 1 | 12514 | 31.84 | Planctomyces sp. SH-PL62 plasmid pPL62-4 | CP011277 | GBK | FAA | FNA | FFN | TAB |
CP011273 | 69.3 | 5056 | 1 | 6507102 | 13.58 | Planctomyces sp. SH-PL62 | CP011273 | GBK | FAA | FNA | FFN | TAB |
CP014640 | 32.29 | 8 | 1 | 7504 | 7.25 | Chlamydia sp. 2742-308 plasmid | CP014640 | GBK | FAA | FNA | FFN | TAB |
CP014639 | 38.54 | 996 | 1 | 1113233 | 9.51 | Chlamydia sp. 2742-308 genome | CP014639 | GBK | FAA | FNA | FFN | TAB |
CP015295 | 36.24 | 8 | 1 | 7502 | 8.42 | Chlamydia trachomatis E-103 plasmid 1 | CP015295 | GBK | FAA | FNA | FFN | TAB |
CP015294 | 41.31 | 905 | 1 | 1043019 | 8.91 | Chlamydia trachomatis E-103 | CP015294 | GBK | FAA | FNA | FFN | TAB |
CP015297 | 36.24 | 8 | 1 | 7502 | 8.42 | Chlamydia trachomatis E-160 plasmid 1 | CP015297 | GBK | FAA | FNA | FFN | TAB |
AE002160 | 40.34 | 904 | 1 | 1072950 | 8.85 | Chlamydia muridarum Nigg | AE002160 | GBK | FAA | FNA | FFN | TAB |
CP001998 | 53.6 | 3120 | 1 | 3750771 | 9.81 | Coraliomargarita akajimensis DSM 45221 | CP001998 | GBK | FAA | FNA | FFN | TAB |
CP015296 | 41.31 | 905 | 1 | 1043007 | 8.83 | Chlamydia trachomatis E-160 | CP015296 | GBK | FAA | FNA | FFN | TAB |
CP015299 | 36.24 | 8 | 1 | 7502 | 8.42 | Chlamydia trachomatis E-547 plasmid 1 | CP015299 | GBK | FAA | FNA | FFN | TAB |
CP015298 | 41.31 | 904 | 1 | 1043003 | 8.86 | Chlamydia trachomatis E-547 | CP015298 | GBK | FAA | FNA | FFN | TAB |
CP015301 | 36.22 | 8 | 1 | 7493 | 8.43 | Chlamydia trachomatis E-8873 plasmid 1 | CP015301 | GBK | FAA | FNA | FFN | TAB |
CP015300 | 41.31 | 904 | 1 | 1042717 | 8.88 | Chlamydia trachomatis E-8873 | CP015300 | GBK | FAA | FNA | FFN | TAB |
CP015303 | 36.23 | 8 | 1 | 7502 | 8.42 | Chlamydia trachomatis E-32931 plasmid 1 | CP015303 | GBK | FAA | FNA | FFN | TAB |
CP015302 | 41.3 | 912 | 1 | 1048917 | 9.0 | Chlamydia trachomatis E-32931 | CP015302 | GBK | FAA | FNA | FFN | TAB |
CP015305 | 36.22 | 8 | 1 | 7502 | 8.42 | Chlamydia trachomatis E-DK-20 plasmid 1 | CP015305 | GBK | FAA | FNA | FFN | TAB |
CP015304 | 41.31 | 903 | 1 | 1048033 | 9.32 | Chlamydia trachomatis E-DK-20 | CP015304 | GBK | FAA | FNA | FFN | TAB |
CP015307 | 36.25 | 8 | 1 | 7493 | 8.43 | Chlamydia trachomatis F-6068 plasmid 1 | CP015307 | GBK | FAA | FNA | FFN | TAB |
CR848038 | 39.87 | 932 | 1 | 1144377 | 11.64 | Chlamydia abortus S26/3 | CR848038 | GBK | FAA | FNA | FFN | TAB |
CP015306 | 41.31 | 903 | 1 | 1042738 | 8.9 | Chlamydia trachomatis F-6068 | CP015306 | GBK | FAA | FNA | FFN | TAB |
CP015409 | 55.66 | 2333 | 1 | 2745278 | 11.43 | Akkermansia muciniphila YL44 | CP015409 | GBK | FAA | FNA | FFN | TAB |
CP016094 | 66.48 | 3510 | 1 | 4199284 | 9.58 | Lacunisphaera limnophila IG16b | CP016094 | GBK | FAA | FNA | FFN | TAB |
MGLR01000000 | 44.72 | 1466 | 30 | 1569649 | 7.99 | Chlamydiae bacterium RIFCSPHIGHO2_01_FULL_44_39 | MGLR01000000 | GBK | FAA | FNA | FFN | TAB |
MGLV01000000 | 44.72 | 1470 | 30 | 1568548 | 7.45 | Chlamydiae bacterium RIFCSPHIGHO2_12_FULL_44_59 | MGLV01000000 | GBK | FAA | FNA | FFN | TAB |
MGLW01000000 | 48.45 | 1065 | 71 | 1258484 | 15.46 | Chlamydiae bacterium RIFCSPHIGHO2_12_FULL_49_11 | MGLW01000000 | GBK | FAA | FNA | FFN | TAB |
MGLY01000000 | 48.59 | 1166 | 94 | 1320387 | 30.52 | Chlamydiae bacterium RIFCSPHIGHO2_12_FULL_49_9 | MGLY01000000 | GBK | FAA | FNA | FFN | TAB |
MGLO01000000 | 49.34 | 993 | 32 | 1177368 | 11.23 | Chlamydiae bacterium GWA2_50_15 | MGLO01000000 | GBK | FAA | FNA | FFN | TAB |
MGLP01000000 | 48.94 | 966 | 52 | 1172283 | 18.56 | Chlamydiae bacterium GWC2_50_10 | MGLP01000000 | GBK | FAA | FNA | FFN | TAB |
MGLQ01000000 | 49.23 | 760 | 93 | 1019733 | 31.98 | Chlamydiae bacterium GWF2_49_8 | MGLQ01000000 | GBK | FAA | FNA | FFN | TAB |
FM872307 | 41.3 | 880 | 1 | 1044282 | 11.35 | Chlamydia trachomatis B/TZ1A828/OT | FM872307 | GBK | FAA | FNA | FFN | TAB |
MGLS01000000 | 44.66 | 1156 | 104 | 1342635 | 14.94 | Chlamydiae bacterium RIFCSPHIGHO2_02_FULL_45_9 | MGLS01000000 | GBK | FAA | FNA | FFN | TAB |
MGLU01000000 | 27.43 | 817 | 98 | 974360 | 13.68 | Chlamydiae bacterium RIFCSPHIGHO2_12_FULL_27_8 | MGLU01000000 | GBK | FAA | FNA | FFN | TAB |
MGLX01000000 | 48.91 | 1190 | 72 | 1397302 | 10.06 | Chlamydiae bacterium RIFCSPHIGHO2_12_FULL_49_32 | MGLX01000000 | GBK | FAA | FNA | FFN | TAB |
MGLT01000000 | 49.08 | 1187 | 69 | 1387015 | 10.55 | Chlamydiae bacterium RIFCSPHIGHO2_02_FULL_49_29 | MGLT01000000 | GBK | FAA | FNA | FFN | TAB |
MGLZ01000000 | 28.07 | 572 | 75 | 708526 | 30.63 | Chlamydiae bacterium RIFCSPLOWO2_01_FULL_28_7 | MGLZ01000000 | GBK | FAA | FNA | FFN | TAB |
MGMA01000000 | 44.74 | 1438 | 29 | 1537590 | 7.54 | Chlamydiae bacterium RIFCSPLOWO2_01_FULL_44_52 | MGMA01000000 | GBK | FAA | FNA | FFN | TAB |
MGMB01000000 | 44.7 | 1475 | 30 | 1575869 | 7.54 | Chlamydiae bacterium RIFCSPLOWO2_02_FULL_45_22 | MGMB01000000 | GBK | FAA | FNA | FFN | TAB |
MGMC01000000 | 48.99 | 1175 | 58 | 1413329 | 16.36 | Chlamydiae bacterium RIFCSPLOWO2_02_FULL_49_12 | MGMC01000000 | GBK | FAA | FNA | FFN | TAB |
MGMD01000000 | 44.75 | 1443 | 28 | 1542182 | 7.68 | Chlamydiae bacterium RIFCSPLOWO2_12_FULL_45_20 | MGMD01000000 | GBK | FAA | FNA | FFN | TAB |
MGME01000000 | 49.16 | 1224 | 46 | 1418742 | 11.43 | Chlamydiae bacterium RIFCSPLOWO2_12_FULL_49_12 | MGME01000000 | GBK | FAA | FNA | FFN | TAB |
FM872308 | 41.3 | 875 | 1 | 1044352 | 11.48 | Chlamydia trachomatis B/Jali20/OT | FM872308 | GBK | FAA | FNA | FFN | TAB |
CP018053 | 36.28 | 7 | 1 | 7503 | 12.55 | Chlamydia trachomatis QH111L plasmid 1 | CP018053 | GBK | FAA | FNA | FFN | TAB |
CP018052 | 41.28 | 888 | 1 | 1025839 | 9.67 | Chlamydia trachomatis QH111L | CP018052 | GBK | FAA | FNA | FFN | TAB |
MKSG01000000 | 32.42 | 2075 | 98 | 2529957 | 10.34 | Chlamydia sp. 32-24 | MKSG01000000 | GBK | FAA | FNA | FFN | TAB |
MKSK01000000 | 38.12 | 2327 | 8 | 2834110 | 12.61 | Chlamydiales bacterium 38-26 | MKSK01000000 | GBK | FAA | FNA | FFN | TAB |
CP019083 | 65.28 | 71 | 1 | 111833 | 22.82 | Paludisphaera borealis PX4 plasmid 1 | CP019083 | GBK | FAA | FNA | FFN | TAB |
CP019084 | 59.29 | 30 | 1 | 42519 | 32.74 | Paludisphaera borealis PX4 plasmid 2 | CP019084 | GBK | FAA | FNA | FFN | TAB |
CP019082 | 66.32 | 5619 | 1 | 7497544 | 14.67 | Paludisphaera borealis PX4 | CP019082 | GBK | FAA | FNA | FFN | TAB |
CP017641 | 55.9 | 6627 | 1 | 8920478 | 12.54 | Fuerstia marisgermanicae NH11 | CP017641 | GBK | FAA | FNA | FFN | TAB |
CP019633 | 46.2 | 2282 | 1 | 2951611 | 10.24 | Sedimentisphaera cyanobacteriorum L21-RPul-D3 | CP019633 | GBK | FAA | FNA | FFN | TAB |
CP019646 | 47.04 | 2931 | 1 | 3868357 | 10.46 | Phycisphaerae bacterium SM-Chi-D1 | CP019646 | GBK | FAA | FNA | FFN | TAB |
AM884177 | 41.33 | 874 | 1 | 1038863 | 9.76 | Chlamydia trachomatis L2b/UCH-1/proctitis | AM884177 | GBK | FAA | FNA | FFN | TAB |
CP019791 | 51.98 | 3493 | 1 | 4250973 | 11.0 | Phycisphaerae bacterium ST-NAGAB-D1 | CP019791 | GBK | FAA | FNA | FFN | TAB |
CP019793 | 31.75 | 8 | 1 | 7492 | 7.5 | Chlamydia gallinacea JX-1 plasmid 1 | CP019793 | GBK | FAA | FNA | FFN | TAB |
CP019792 | 37.93 | 885 | 1 | 1059522 | 12.25 | Chlamydia gallinacea JX-1 | CP019792 | GBK | FAA | FNA | FFN | TAB |
CP021023 | 46.31 | 2371 | 1 | 3192293 | 10.14 | Sedimentisphaera salicampi ST-PulAB-D4 | CP021023 | GBK | FAA | FNA | FFN | TAB |
CP021996 | 39.86 | 925 | 1 | 1144357 | 13.89 | Chlamydia abortus GN6 | CP021996 | GBK | FAA | FNA | FFN | TAB |
CP018477 | 57.34 | 4504 | 1 | 4810751 | 13.78 | Thermogutta terrifontis R1 | CP018477 | GBK | FAA | FNA | FFN | TAB |
CP023344 | 62.25 | 3763 | 1 | 4730447 | 10.15 | Nibricoccus aquaticus HZ-65 | CP023344 | GBK | FAA | FNA | FFN | TAB |
PAQS01000000 | 38.48 | 2460 | 49 | 3152361 | 9.56 | Waddliaceae bacterium | PAQS01000000 | GBK | FAA | FNA | FFN | TAB |
CP024454 | 32.89 | 6 | 1 | 7553 | 26.4 | Chlamydia psittaci (Chlamydophila psittaci) GIMC 2003:Cps25SM plasmid 1 | CP024454 | GBK | FAA | FNA | FFN | TAB |
CP024453 | 39.11 | 1019 | 1 | 1166857 | 8.71 | Chlamydia psittaci (Chlamydophila psittaci) GIMC 2003:Cps25SM | CP024453 | GBK | FAA | FNA | FFN | TAB |
AM884176 | 41.33 | 874 | 1 | 1038842 | 9.77 | Chlamydia trachomatis L2/434/Bu | AM884176 | GBK | FAA | FNA | FFN | TAB |
CP024456 | 32.88 | 6 | 1 | 7549 | 26.36 | Chlamydia psittaci (Chlamydophila psittaci) GIMC 2004:CpsAP23 plasmid 1 | CP024456 | GBK | FAA | FNA | FFN | TAB |
CP024455 | 39.06 | 1021 | 1 | 1172364 | 8.78 | Chlamydia psittaci (Chlamydophila psittaci) GIMC 2004:CpsAP23 | CP024455 | GBK | FAA | FNA | FFN | TAB |
CP024452 | 32.89 | 6 | 1 | 7553 | 26.4 | Chlamydia psittaci (Chlamydophila psittaci) GIMC 2005:CpsCP1 plasmid 1 | CP024452 | GBK | FAA | FNA | FFN | TAB |
CP024451 | 39.06 | 1022 | 1 | 1172381 | 8.8 | Chlamydia psittaci (Chlamydophila psittaci) GIMC 2005:CpsCP1 | CP024451 | GBK | FAA | FNA | FFN | TAB |
PFAD01000000 | 42.36 | 1581 | 21 | 1683436 | 6.55 | Chlamydiae bacterium CG10_big_fil_rev_8_21_14_0_10_42_34 | PFAD01000000 | GBK | FAA | FNA | FFN | TAB |
PFAC01000000 | 35.13 | 1720 | 62 | 1738633 | 9.63 | Chlamydiae bacterium CG10_big_fil_rev_8_21_14_0_10_35_9 | PFAC01000000 | GBK | FAA | FNA | FFN | TAB |
CP017730 | 41.3 | 901 | 1 | 1047716 | 9.5 | Chlamydia trachomatis SQ32 | CP017730 | GBK | FAA | FNA | FFN | TAB |
CP017731 | 41.3 | 901 | 1 | 1047716 | 9.5 | Chlamydia trachomatis SQ29 | CP017731 | GBK | FAA | FNA | FFN | TAB |
CP017732 | 41.3 | 911 | 1 | 1048530 | 8.86 | Chlamydia trachomatis SQ20 | CP017732 | GBK | FAA | FNA | FFN | TAB |
CP017733 | 41.3 | 911 | 1 | 1048538 | 8.86 | Chlamydia trachomatis SQ24 | CP017733 | GBK | FAA | FNA | FFN | TAB |
AE002164AE002268 | 40.57 | 1116 | 2 | 1234385 | 10.38 | Chlamydia pneumoniae AR39 | AE002164AE002268 | GBK | FAA | FNA | FFN | TAB |
CP017736 | 41.31 | 894 | 1 | 1042567 | 10.61 | Chlamydia trachomatis SQ09 | CP017736 | GBK | FAA | FNA | FFN | TAB |
CP017737 | 41.31 | 895 | 1 | 1042575 | 10.71 | Chlamydia trachomatis SQ10 | CP017737 | GBK | FAA | FNA | FFN | TAB |
CP017738 | 41.3 | 896 | 1 | 1042577 | 10.56 | Chlamydia trachomatis SQ12 | CP017738 | GBK | FAA | FNA | FFN | TAB |
CP017739 | 41.31 | 897 | 1 | 1042578 | 10.53 | Chlamydia trachomatis SQ14 | CP017739 | GBK | FAA | FNA | FFN | TAB |
CP017740 | 41.31 | 911 | 1 | 1048696 | 8.84 | Chlamydia trachomatis SQ01 | CP017740 | GBK | FAA | FNA | FFN | TAB |
CP017741 | 41.3 | 910 | 1 | 1048696 | 8.87 | Chlamydia trachomatis SQ02 | CP017741 | GBK | FAA | FNA | FFN | TAB |
CP017742 | 41.31 | 911 | 1 | 1048696 | 8.84 | Chlamydia trachomatis SQ05 | CP017742 | GBK | FAA | FNA | FFN | TAB |
CP017743 | 41.31 | 904 | 1 | 1043246 | 8.92 | Chlamydia trachomatis SQ25 | CP017743 | GBK | FAA | FNA | FFN | TAB |
CP017745 | 41.3 | 911 | 1 | 1048307 | 8.93 | Chlamydia trachomatis SQ15 | CP017745 | GBK | FAA | FNA | FFN | TAB |
CP017746 | 41.3 | 911 | 1 | 1048306 | 8.93 | Chlamydia trachomatis SQ19 | CP017746 | GBK | FAA | FNA | FFN | TAB |
CP001745 | 57.03 | 60 | 1 | 37010 | 6.84 | Planctopirus limnophila DSM 3776 plasmid pPLIM01 | CP001745 | GBK | FAA | FNA | FFN | TAB |
PEQL01000000 | 41.53 | 2540 | 39 | 3042961 | 12.09 | Parachlamydia sp | PEQL01000000 | GBK | FAA | FNA | FFN | TAB |
CP024084 | 39.87 | 1042 | 1 | 1144224 | 9.4 | Chlamydia abortus GIMC 2006:CabB577 | CP024084 | GBK | FAA | FNA | FFN | TAB |
CP027206 | 40.34 | 879 | 1 | 1072968 | 13.21 | Chlamydia muridarum Nigg isolate CM021 | CP027206 | GBK | FAA | FNA | FFN | TAB |
CP027208 | 40.34 | 899 | 1 | 1072952 | 8.56 | Chlamydia muridarum Nigg isolate CM010 | CP027208 | GBK | FAA | FNA | FFN | TAB |
CP027209 | 40.34 | 897 | 1 | 1072948 | 8.77 | Chlamydia muridarum Nigg isolate CM009 | CP027209 | GBK | FAA | FNA | FFN | TAB |
CP027210 | 40.34 | 898 | 1 | 1072952 | 8.67 | Chlamydia muridarum Nigg isolate CM008 | CP027210 | GBK | FAA | FNA | FFN | TAB |
CP027211 | 40.34 | 868 | 1 | 1072986 | 13.71 | Chlamydia muridarum Nigg isolate CM007 | CP027211 | GBK | FAA | FNA | FFN | TAB |
CP027212 | 40.34 | 894 | 1 | 1072952 | 9.11 | Chlamydia muridarum Nigg isolate CM006 | CP027212 | GBK | FAA | FNA | FFN | TAB |
CP027213 | 40.34 | 899 | 1 | 1072947 | 8.64 | Chlamydia muridarum Nigg isolate CM005 | CP027213 | GBK | FAA | FNA | FFN | TAB |
CP027215 | 40.34 | 898 | 1 | 1072945 | 8.66 | Chlamydia muridarum Nigg isolate CM003 | CP027215 | GBK | FAA | FNA | FFN | TAB |
CP001744 | 53.66 | 4198 | 1 | 5423075 | 15.39 | Planctopirus limnophila DSM 3776 | CP001744 | GBK | FAA | FNA | FFN | TAB |
CP027216 | 40.34 | 896 | 1 | 1072951 | 9.18 | Chlamydia muridarum Nigg isolate CM002 | CP027216 | GBK | FAA | FNA | FFN | TAB |
CP027217 | 40.34 | 889 | 1 | 1072960 | 10.69 | Chlamydia muridarum Nigg isolate CM001 | CP027217 | GBK | FAA | FNA | FFN | TAB |
CP027207 | 40.34 | 900 | 1 | 1072948 | 8.55 | Chlamydia muridarum Nigg isolate CM012 | CP027207 | GBK | FAA | FNA | FFN | TAB |
CP027214 | 40.34 | 896 | 1 | 1072947 | 9.36 | Chlamydia muridarum Nigg isolate CM004 | CP027214 | GBK | FAA | FNA | FFN | TAB |
CP027227 | 59.96 | 4164 | 1 | 5242681 | 9.66 | Victivallales bacterium CCUG 44730 | CP027227 | GBK | FAA | FNA | FFN | TAB |
CP025958 | 67.36 | 6994 | 1 | 8998893 | 19.36 | Gemmata obscuriglobus DSM 5831 | CP025958 | GBK | FAA | FNA | FFN | TAB |
PSRO01000000 | 36.58 | 1294 | 85 | 1379772 | 10.53 | Chlamydiae bacterium | PSRO01000000 | GBK | FAA | FNA | FFN | TAB |
QQBG01000000 | 43.73 | 756 | 28 | 780468 | 6.19 | Candidatus Similichlamydia laticola Hat2 | QQBG01000000 | GBK | FAA | FNA | FFN | TAB |
CP007217 | 40.34 | 887 | 1 | 1072952 | 9.16 | Chlamydia muridarum Nigg3-28 | CP007217 | GBK | FAA | FNA | FFN | TAB |
DLXJ01000000 | 44.35 | 1765 | 315 | 1643951 | 17.67 | Parachlamydiales bacterium | DLXJ01000000 | GBK | FAA | FNA | FFN | TAB |
CP002053 | 36.33 | 8 | 1 | 7493 | 6.47 | Chlamydia trachomatis D-EC plasmid pCTDEC1 | CP002053 | GBK | FAA | FNA | FFN | TAB |
DNHV01000000 | 49.18 | 1238 | 85 | 1379982 | 11.87 | Parachlamydiales bacterium | DNHV01000000 | GBK | FAA | FNA | FFN | TAB |
DPTR01000000 | 49.32 | 1075 | 184 | 1056156 | 14.81 | Parachlamydiales bacterium | DPTR01000000 | GBK | FAA | FNA | FFN | TAB |
DPTF01000000 | 49.45 | 1112 | 119 | 1214877 | 14.93 | Parachlamydiales bacterium | DPTF01000000 | GBK | FAA | FNA | FFN | TAB |
QMOL01000000 | 37.86 | 2030 | 239 | 2412545 | 12.09 | Chlamydiae bacterium | QMOL01000000 | GBK | FAA | FNA | FFN | TAB |
CP024736 | 55.39 | 2316 | 1 | 2772237 | 12.96 | Akkermansia muciniphila AMDK-1 | CP024736 | GBK | FAA | FNA | FFN | TAB |
CP024738 | 55.76 | 2239 | 1 | 2663833 | 15.45 | Akkermansia muciniphila AMDK-3 | CP024738 | GBK | FAA | FNA | FFN | TAB |
CP024740 | 55.76 | 2245 | 1 | 2664010 | 12.72 | Akkermansia muciniphila AMDK-4 | CP024740 | GBK | FAA | FNA | FFN | TAB |
CP024742 | 55.25 | 2315 | 1 | 2764211 | 13.17 | Akkermansia muciniphila AMDK-2 | CP024742 | GBK | FAA | FNA | FFN | TAB |
CP033060 | 32.95 | 7 | 1 | 7630 | 20.66 | Chlamydia psittaci Ful127 plasmid 1 | CP033060 | GBK | FAA | FNA | FFN | TAB |
CP033059 | 39.06 | 970 | 1 | 1171317 | 10.27 | Chlamydia psittaci Ful127 | CP033059 | GBK | FAA | FNA | FFN | TAB |
AE009440 | 40.58 | 1113 | 1 | 1225935 | 9.03 | Chlamydia pneumoniae TW-183 | AE009440 | GBK | FAA | FNA | FFN | TAB |
CP002052 | 41.31 | 870 | 1 | 1042522 | 9.24 | Chlamydia trachomatis D-EC | CP002052 | GBK | FAA | FNA | FFN | TAB |
CP025825 | 55.25 | 2332 | 1 | 2763834 | 17.35 | Akkermansia muciniphila AMDK-10 | CP025825 | GBK | FAA | FNA | FFN | TAB |
CP025826 | 55.26 | 2300 | 1 | 2764311 | 13.16 | Akkermansia muciniphila AMDK-11 | CP025826 | GBK | FAA | FNA | FFN | TAB |
CP025827 | 55.26 | 2302 | 1 | 2764297 | 12.88 | Akkermansia muciniphila AMDK-12 | CP025827 | GBK | FAA | FNA | FFN | TAB |
CP025829 | 55.25 | 2317 | 1 | 2764188 | 13.84 | Akkermansia muciniphila AMDK-14 | CP025829 | GBK | FAA | FNA | FFN | TAB |
CP025833 | 55.3 | 2327 | 1 | 2770124 | 13.27 | Akkermansia muciniphila AMDK-18 | CP025833 | GBK | FAA | FNA | FFN | TAB |
CP025834 | 55.32 | 2250 | 1 | 2724248 | 12.88 | Akkermansia muciniphila AMDK-19 | CP025834 | GBK | FAA | FNA | FFN | TAB |
CP025837 | 55.32 | 2239 | 1 | 2724161 | 15.39 | Akkermansia muciniphila AMDK-22 | CP025837 | GBK | FAA | FNA | FFN | TAB |
CP025831 | 55.3 | 2311 | 1 | 2770073 | 13.95 | Akkermansia muciniphila AMDK-16 | CP025831 | GBK | FAA | FNA | FFN | TAB |
CP025832 | 55.3 | 2311 | 1 | 2770146 | 13.8 | Akkermansia muciniphila AMDK-17 | CP025832 | GBK | FAA | FNA | FFN | TAB |
CP025823 | 55.3 | 2351 | 1 | 2799431 | 12.66 | Akkermansia muciniphila AMDK-7 | CP025823 | GBK | FAA | FNA | FFN | TAB |
CP001886 | 41.31 | 927 | 1 | 1042996 | 9.31 | Chlamydia trachomatis E/150 | CP001886 | GBK | FAA | FNA | FFN | TAB |
CP025824 | 55.39 | 2376 | 1 | 2824041 | 12.87 | Akkermansia muciniphila AMDK-8 | CP025824 | GBK | FAA | FNA | FFN | TAB |
CP025828 | 55.25 | 2327 | 1 | 2763965 | 16.94 | Akkermansia muciniphila AMDK-13 | CP025828 | GBK | FAA | FNA | FFN | TAB |
CP025830 | 55.3 | 2315 | 1 | 2770098 | 14.28 | Akkermansia muciniphila AMDK-15 | CP025830 | GBK | FAA | FNA | FFN | TAB |
CP025835 | 55.32 | 2250 | 1 | 2724186 | 13.46 | Akkermansia muciniphila AMDK-20 | CP025835 | GBK | FAA | FNA | FFN | TAB |
CP025836 | 55.32 | 2270 | 1 | 2724154 | 14.16 | Akkermansia muciniphila AMDK-21 | CP025836 | GBK | FAA | FNA | FFN | TAB |
CP033388 | 55.32 | 2414 | 1 | 2860407 | 12.08 | Akkermansia muciniphila CBA5201 | CP033388 | GBK | FAA | FNA | FFN | TAB |
CP036201 | 52.0 | 3474 | 1 | 4107983 | 11.24 | Verrucomicrobia bacterium S94 | CP036201 | GBK | FAA | FNA | FFN | TAB |
CP036293 | 55.74 | 2268 | 1 | 2801917 | 12.95 | Akkermansia muciniphila 139 | CP036293 | GBK | FAA | FNA | FFN | TAB |
LN867111 | 44.63 | 15 | 1 | 9136 | 17.18 | Estrella lausannensis CRIB-30 plasmid 1 | LN867111 | GBK | FAA | FNA | FFN | TAB |
CWGJ01000000 | 48.23 | 2202 | 29 | 2820195 | 13.08 | Estrella lausannensis CRIB-30 | CWGJ01000000 | GBK | FAA | FNA | FFN | TAB |
CP001887 | 41.31 | 920 | 1 | 1042810 | 9.07 | Chlamydia trachomatis G/9768 | CP001887 | GBK | FAA | FNA | FFN | TAB |
LN554883 | 39.86 | 933 | 1 | 1144467 | 8.73 | Chlamydia abortus 1H | LN554883 | GBK | FAA | FNA | FFN | TAB |
LN589721 | 39.86 | 933 | 1 | 1144467 | 8.73 | Chlamydia abortus 1B_cevac | LN589721 | GBK | FAA | FNA | FFN | TAB |
FLYO01000000 | 41.8 | 851 | 54 | 929815 | 8.17 | Chlamydiales bacterium SCGC AG-110-M15 | FLYO01000000 | GBK | FAA | FNA | FFN | TAB |
FLYF01000000 | 35.45 | 876 | 89 | 986924 | 8.51 | Chlamydiales bacterium SCGC AB-751-O23 | FLYF01000000 | GBK | FAA | FNA | FFN | TAB |
FLYP01000000 | 46.83 | 1235 | 96 | 1299661 | 14.3 | Chlamydiales bacterium SCGC AG-110-P3 | FLYP01000000 | GBK | FAA | FNA | FFN | TAB |
LT629973 | 57.65 | 2532 | 1 | 3074078 | 8.8 | Akkermansia glycaniphila isolate APytT | LT629973 | GBK | FAA | FNA | FFN | TAB |
LT934425 | 41.09 | 4035 | 1 | 4406153 | 18.67 | Kuenenia stuttgartiensis isolate kuenenia_mbr1_ru-nijmegen | LT934425 | GBK | FAA | FNA | FFN | TAB |
LT993739 | 31.12 | 8 | 1 | 7533 | 5.18 | Chlamydia sp. H15-1957-10C | LT993739 | GBK | FAA | FNA | FFN | TAB |
LT993738 | 37.46 | 984 | 1 | 1198609 | 10.14 | Chlamydia sp. H15-1957-10C | LT993738 | GBK | FAA | FNA | FFN | TAB |
LS992155 | 33.05 | 8 | 1 | 7559 | 6.3 | Chlamydia sp. S15-834C isolate S15-834K | LS992155 | GBK | FAA | FNA | FFN | TAB |
CP001888 | 41.31 | 927 | 1 | 1042354 | 9.26 | Chlamydia trachomatis G/11222 | CP001888 | GBK | FAA | FNA | FFN | TAB |
LS992154 | 37.5 | 973 | 1 | 1155104 | 9.97 | Chlamydia sp. S15-834C isolate S15-834K | LS992154 | GBK | FAA | FNA | FFN | TAB |
CAAJGQ000000000 | 36.16 | 1692 | 38 | 1830543 | 9.65 | Rhabdochlamydia sp. T3358 | CAAJGQ000000000 | GBK | FAA | FNA | FFN | TAB |
NZ_BASL00000000 | 34.78 | 2017 | 795 | 2722699 | 18.6 | Candidatus Protochlamydia sp. R18 S13 | NZ_BASL00000000 | GBK | FAA | FNA | FFN | TAB |
NZ_CCJF00000000 | 42.75 | 2451 | 5 | 2956128 | 15.15 | Protochlamydia massiliensis | NZ_CCJF00000000 | GBK | FAA | FNA | FFN | TAB |
NZ_BBPT00000000 | 38.71 | 2025 | 34 | 2307885 | 11.22 | Parachlamydiaceae bacterium HS-T3 | NZ_BBPT00000000 | GBK | FAA | FNA | FFN | TAB |
NZ_BAWW00000000 | 38.94 | 2409 | 72 | 2999361 | 12.34 | Parachlamydia acanthamoebae Bn9 | NZ_BAWW00000000 | GBK | FAA | FNA | FFN | TAB |
NZ_LM997411 | 41.48 | 2225 | 1 | 2476671 | 15.96 | Methylacidiphilum fumariolicum SolV | NZ_LM997411 | GBK | FAA | FNA | FFN | TAB |
NZ_FCNU00000000 | 42.05 | 2766 | 33 | 3423982 | 15.54 | Parachlamydia sp. C2 | NZ_FCNU00000000 | GBK | FAA | FNA | FFN | TAB |
NZ_LVEB00000000 | 43.82 | 1792 | 195 | 2111718 | 6.15 | Waddlia chondrophila WSU 86-1044 | NZ_LVEB00000000 | GBK | FAA | FNA | FFN | TAB |
NZ_BCPZ00000000 | 34.48 | 1817 | 402 | 2484573 | 18.74 | Protochlamydia sp. W-9 | NZ_BCPZ00000000 | GBK | FAA | FNA | FFN | TAB |
CP001889 | 41.31 | 919 | 1 | 1042875 | 9.1 | Chlamydia trachomatis G/11074 | CP001889 | GBK | FAA | FNA | FFN | TAB |
NZ_CP020535 | 41.3 | 900 | 1 | 1042393 | 9.53 | Chlamydia trachomatis chxRP4F1 | NZ_CP020535 | GBK | FAA | FNA | FFN | TAB |
NZ_CP020536 | 41.3 | 904 | 1 | 1042369 | 8.96 | Chlamydia trachomatis chxRP4D10 | NZ_CP020536 | GBK | FAA | FNA | FFN | TAB |
NZ_CP020537 | 41.3 | 899 | 1 | 1042376 | 9.64 | Chlamydia trachomatis chxRP1H1 | NZ_CP020537 | GBK | FAA | FNA | FFN | TAB |
NZ_CM008979 | 32.0 | 8 | 1 | 7522 | 7.79 | Candidatus Chlamydia corallus G3/2742-324 plasmid 1 | NZ_CM008979 | GBK | FAA | FNA | FFN | TAB |
NZ_NWQK00000000 | 39.33 | 988 | 6 | 1196452 | 12.31 | Candidatus Chlamydia corallus G3/2742-324 | NZ_NWQK00000000 | GBK | FAA | FNA | FFN | TAB |
NZ_PPEU00000000 | 39.54 | 843 | 169 | 981843 | 21.8 | Candidatus Similichlamydia epinepheli GCCT14 | NZ_PPEU00000000 | GBK | FAA | FNA | FFN | TAB |
NZ_CP035484 | 41.51 | 920 | 1 | 1054567 | 8.75 | Chlamydia trachomatis tet9 | NZ_CP035484 | GBK | FAA | FNA | FFN | TAB |
NZ_LT999999 | 42.24 | 915 | 1 | 1094002 | 10.07 | Chlamydia suis isolate 4-29b | NZ_LT999999 | GBK | FAA | FNA | FFN | TAB |
NZ_LT999998 | 42.08 | 901 | 1 | 1075010 | 9.31 | Chlamydia suis isolate 3-25b | NZ_LT999998 | GBK | FAA | FNA | FFN | TAB |
NZ_LS398099 | 41.58 | 904 | 1 | 1082175 | 9.19 | Chlamydia suis isolate 9-1b | NZ_LS398099 | GBK | FAA | FNA | FFN | TAB |
CP001890 | 41.31 | 926 | 1 | 1043025 | 9.13 | Chlamydia trachomatis E/11023 | CP001890 | GBK | FAA | FNA | FFN | TAB |
NZ_LS398098 | 42.17 | 913 | 1 | 1101914 | 9.77 | Chlamydia suis isolate 5-27b | NZ_LS398098 | GBK | FAA | FNA | FFN | TAB |
NZ_LT821324 | 36.86 | 8 | 1 | 7494 | 7.01 | Chlamydia suis isolate SWA-2 | NZ_LT821324 | GBK | FAA | FNA | FFN | TAB |
NZ_LT821323 | 42.08 | 902 | 1 | 1075789 | 9.5 | Chlamydia suis isolate SWA-2 | NZ_LT821323 | GBK | FAA | FNA | FFN | TAB |
NZ_CAAA00000000000 | 38.29 | 942 | 2 | 1146546 | 10.78 | Chlamydia sp. RSHA | NZ_CAAA00000000000 | GBK | FAA | FNA | FFN | TAB |
CP001929 | 37.61 | 22 | 1 | 15593 | 17.85 | Waddlia chondrophila WSU 86-1044 plasmid pWc | CP001929 | GBK | FAA | FNA | FFN | TAB |
CP001928 | 43.78 | 1934 | 1 | 2116312 | 5.3 | Waddlia chondrophila WSU 86-1044 | CP001928 | GBK | FAA | FNA | FFN | TAB |
CP001930 | 41.31 | 921 | 1 | 1042811 | 8.93 | Chlamydia trachomatis G/9301 | CP001930 | GBK | FAA | FNA | FFN | TAB |
CP002055 | 36.33 | 8 | 1 | 7493 | 6.47 | Chlamydia trachomatis D-LC plasmid pCTDLC1 | CP002055 | GBK | FAA | FNA | FFN | TAB |
AE015926 | 33.69 | 7 | 1 | 7966 | 22.19 | Chlamydia caviae GPIC plasmid pCpGP1 | AE015926 | GBK | FAA | FNA | FFN | TAB |
CP002054 | 41.31 | 870 | 1 | 1042520 | 9.23 | Chlamydia trachomatis D-LC | CP002054 | GBK | FAA | FNA | FFN | TAB |
CP002546 | 56.45 | 4750 | 1 | 6006602 | 14.24 | Rubinisphaera brasiliensis DSM 5305 | CP002546 | GBK | FAA | FNA | FFN | TAB |
ACZE01000000 | 38.97 | 2809 | 95 | 2971261 | 9.74 | Parachlamydia acanthamoebae Hall's coccus | ACZE01000000 | GBK | FAA | FNA | FFN | TAB |
CP002354 | 67.0 | 32 | 1 | 56340 | 25.78 | Isosphaera pallida ATCC 43644 plasmid pISOP01 | CP002354 | GBK | FAA | FNA | FFN | TAB |
CP002353 | 62.44 | 3690 | 1 | 5472964 | 15.31 | Isosphaera pallida ATCC 43644 | CP002353 | GBK | FAA | FNA | FFN | TAB |
CP002550 | 32.89 | 8 | 1 | 7553 | 13.81 | Chlamydia psittaci 6BC plasmid p6BC | CP002550 | GBK | FAA | FNA | FFN | TAB |
CP002549 | 39.06 | 967 | 1 | 1171660 | 9.89 | Chlamydia psittaci 6BC | CP002549 | GBK | FAA | FNA | FFN | TAB |
BX119912 | 55.4 | 7325 | 1 | 7145576 | 2.71 | Rhodopirellula baltica SH 1 | BX119912 | GBK | FAA | FNA | FFN | TAB |
CP002608 | 41.08 | 988 | 1 | 1106197 | 7.33 | Chlamydia pecorum E58 | CP002608 | GBK | FAA | FNA | FFN | TAB |
CP002587 | 32.89 | 7 | 1 | 7553 | 11.7 | Chlamydia psittaci 6BC plasmid pCps6BC | CP002587 | GBK | FAA | FNA | FFN | TAB |
AE015925 | 39.22 | 998 | 1 | 1173390 | 10.19 | Chlamydia caviae GPIC | AE015925 | GBK | FAA | FNA | FFN | TAB |
CP002586 | 39.06 | 1002 | 1 | 1171667 | 9.87 | Chlamydia psittaci 6BC | CP002586 | GBK | FAA | FNA | FFN | TAB |
FN652779 | 41.31 | 875 | 1 | 1042839 | 10.25 | Chlamydia trachomatis Sweden2 | FN652779 | GBK | FAA | FNA | FFN | TAB |
CP002024 | 41.33 | 954 | 1 | 1038313 | 9.2 | Chlamydia trachomatis L2c | CP002024 | GBK | FAA | FNA | FFN | TAB |
CP002402 | 36.23 | 8 | 1 | 7480 | 6.19 | Chlamydia trachomatis A2497 plasmid Plasmid0001 | CP002402 | GBK | FAA | FNA | FFN | TAB |
CP002401 | 41.3 | 981 | 1 | 1044326 | 7.73 | Chlamydia trachomatis A2497 | CP002401 | GBK | FAA | FNA | FFN | TAB |
FR872581 | 38.28 | 137 | 1 | 132038 | 13.47 | Simkania negevensis Z plasmid pSn | FR872581 | GBK | FAA | FNA | FFN | TAB |
FR872582 | 41.78 | 2381 | 1 | 2496337 | 8.37 | Simkania negevensis Z main | FR872582 | GBK | FAA | FNA | FFN | TAB |
CP003365 | 60.11 | 30 | 1 | 54731 | 14.57 | Singulisphaera acidiphila DSM 18658 plasmid pSINAC01 | CP003365 | GBK | FAA | FNA | FFN | TAB |
CP003366 | 59.86 | 54 | 1 | 39149 | 22.7 | Singulisphaera acidiphila DSM 18658 plasmid pSINAC02 | CP003366 | GBK | FAA | FNA | FFN | TAB |
CP003367 | 58.99 | 31 | 1 | 32131 | 29.89 | Singulisphaera acidiphila DSM 18658 plasmid pSINAC03 | CP003367 | GBK | FAA | FNA | FFN | TAB |
AE001273 | 41.31 | 894 | 1 | 1042519 | 8.77 | Chlamydia trachomatis D/UW-3/CX | AE001273 | GBK | FAA | FNA | FFN | TAB |
CP003364 | 62.27 | 7136 | 1 | 9629675 | 17.8 | Singulisphaera acidiphila DSM 18658 | CP003364 | GBK | FAA | FNA | FFN | TAB |
CP007054 | 54.44 | 91 | 1 | 99831 | 35.98 | Opitutaceae bacterium TAV5 plasmid | CP007054 | GBK | FAA | FNA | FFN | TAB |
CP007053 | 63.57 | 5980 | 1 | 7317842 | 12.31 | Opitutaceae bacterium TAV5 | CP007053 | GBK | FAA | FNA | FFN | TAB |
FR872580 | 39.03 | 2788 | 1 | 3072383 | 9.75 | Parachlamydia acanthamoebae UV-7 | FR872580 | GBK | FAA | FNA | FFN | TAB |
CP002804 | 39.05 | 978 | 1 | 1169374 | 9.24 | Chlamydia psittaci C19/98 | CP002804 | GBK | FAA | FNA | FFN | TAB |
CP002805 | 39.06 | 975 | 1 | 1172197 | 9.87 | Chlamydia psittaci 01DC11 | CP002805 | GBK | FAA | FNA | FFN | TAB |
CP002806 | 39.06 | 978 | 1 | 1172182 | 9.33 | Chlamydia psittaci 02DC15 | CP002806 | GBK | FAA | FNA | FFN | TAB |
CP002807 | 39.05 | 973 | 1 | 1172032 | 10.34 | Chlamydia psittaci 08DC60 | CP002807 | GBK | FAA | FNA | FFN | TAB |
AP012339 | 69.99 | 81 | 1 | 81157 | 10.57 | Phycisphaera mikurensis NBRC 102666 plasmid pPSMK1 | AP012339 | GBK | FAA | FNA | FFN | TAB |
AP012338 | 73.29 | 3203 | 1 | 3803225 | 10.96 | Phycisphaera mikurensis NBRC 102666 | AP012338 | GBK | FAA | FNA | FFN | TAB |
AE001363 | 40.58 | 1052 | 1 | 1230230 | 10.94 | Chlamydia pneumoniae CWL029 | AE001363 | GBK | FAA | FNA | FFN | TAB |
FM872306 | 41.3 | 879 | 1 | 1044325 | 11.48 | Chlamydia trachomatis A2497 serovar A | FM872306 | GBK | FAA | FNA | FFN | TAB |
CP003812 | 32.82 | 8 | 1 | 7487 | 6.0 | Chlamydia psittaci 84/55 plasmid pcp8455 | CP003812 | GBK | FAA | FNA | FFN | TAB |
CP003790 | 39.06 | 1119 | 1 | 1172064 | 10.27 | Chlamydia psittaci 84/55 | CP003790 | GBK | FAA | FNA | FFN | TAB |
CP003791 | 39.08 | 1042 | 1 | 1147152 | 9.85 | Chlamydia psittaci GR9 | CP003791 | GBK | FAA | FNA | FFN | TAB |
CP003815 | 32.93 | 7 | 1 | 7491 | 29.56 | Chlamydia psittaci MN plasmid pcpMN | CP003815 | GBK | FAA | FNA | FFN | TAB |
CP003792 | 39.06 | 1034 | 1 | 1168490 | 9.57 | Chlamydia psittaci MN | CP003792 | GBK | FAA | FNA | FFN | TAB |
CP003817 | 32.91 | 8 | 1 | 7553 | 7.61 | Chlamydia psittaci VS225 plasmid pcpVS225 | CP003817 | GBK | FAA | FNA | FFN | TAB |
CP003793 | 39.02 | 1108 | 1 | 1157385 | 9.77 | Chlamydia psittaci VS225 | CP003793 | GBK | FAA | FNA | FFN | TAB |
CP003819 | 32.94 | 8 | 1 | 7553 | 6.38 | Chlamydia psittaci WS/RT/E30 plasmid pcpWSRTE30 | CP003819 | GBK | FAA | FNA | FFN | TAB |
CP003794 | 39.03 | 1044 | 1 | 1140789 | 10.1 | Chlamydia psittaci WS/RT/E30 | CP003794 | GBK | FAA | FNA | FFN | TAB |
AP006862 | 33.91 | 8 | 1 | 7552 | 3.07 | Chlamydia felis Fe/C-56 Fe/C-56 plasmid pCfe1 | AP006862 | GBK | FAA | FNA | FFN | TAB |
CP003814 | 32.89 | 8 | 1 | 7553 | 7.65 | Chlamydia psittaci M56 plasmid pcpM56 | CP003814 | GBK | FAA | FNA | FFN | TAB |
CP003795 | 38.79 | 1041 | 1 | 1161385 | 9.77 | Chlamydia psittaci M56 | CP003795 | GBK | FAA | FNA | FFN | TAB |
CP003818 | 32.93 | 8 | 1 | 7553 | 7.65 | Chlamydia psittaci WC plasmid pcpWC | CP003818 | GBK | FAA | FNA | FFN | TAB |
CP003796 | 39.08 | 1046 | 1 | 1172265 | 9.47 | Chlamydia psittaci WC | CP003796 | GBK | FAA | FNA | FFN | TAB |
CP003813 | 32.88 | 8 | 1 | 7552 | 7.6 | Chlamydia psittaci CP3 plasmid pcpCP3 | CP003813 | GBK | FAA | FNA | FFN | TAB |
CP003797 | 39.06 | 1116 | 1 | 1168150 | 9.92 | Chlamydia psittaci CP3 | CP003797 | GBK | FAA | FNA | FFN | TAB |
CP003816 | 32.8 | 8 | 1 | 7552 | 7.6 | Chlamydia psittaci NJ1 plasmid pcpNJ1 | CP003816 | GBK | FAA | FNA | FFN | TAB |
CP003798 | 38.96 | 1044 | 1 | 1161434 | 9.19 | Chlamydia psittaci NJ1 | CP003798 | GBK | FAA | FNA | FFN | TAB |
HE601801 | 41.31 | 876 | 1 | 1042903 | 10.13 | Chlamydia trachomatis E/SW3 | HE601801 | GBK | FAA | FNA | FFN | TAB |
HE601804 | 41.31 | 873 | 1 | 1042736 | 10.29 | Chlamydia trachomatis F/SW4 | HE601804 | GBK | FAA | FNA | FFN | TAB |
AP006861 | 39.38 | 1005 | 1 | 1166239 | 8.13 | Chlamydia felis Fe/C-56 Fe/C-56 | AP006861 | GBK | FAA | FNA | FFN | TAB |
HE601805 | 41.31 | 875 | 1 | 1042743 | 10.13 | Chlamydia trachomatis F/SW5 | HE601805 | GBK | FAA | FNA | FFN | TAB |
HE603209 | 36.26 | 8 | 1 | 7502 | 7.02 | Chlamydia trachomatis A/363 plasmid pA363 sequence | HE603209 | GBK | FAA | FNA | FFN | TAB |
HE601796 | 41.3 | 900 | 1 | 1044026 | 8.94 | Chlamydia trachomatis A/363 | HE601796 | GBK | FAA | FNA | FFN | TAB |
HE603211 | 36.26 | 8 | 1 | 7502 | 7.02 | Chlamydia trachomatis A/7249 plasmid pA7249 sequence | HE603211 | GBK | FAA | FNA | FFN | TAB |
HE601797 | 41.3 | 898 | 1 | 1044377 | 9.03 | Chlamydia trachomatis A/7249 | HE601797 | GBK | FAA | FNA | FFN | TAB |
HE603212 | 36.24 | 8 | 1 | 7502 | 7.02 | Chlamydia trachomatis E/Bour plasmid pBour sequence | HE603212 | GBK | FAA | FNA | FFN | TAB |
HE601870 | 41.31 | 896 | 1 | 1042589 | 8.87 | Chlamydia trachomatis E/Bour | HE601870 | GBK | FAA | FNA | FFN | TAB |
HE603236 | 36.32 | 8 | 1 | 7500 | 7.16 | Chlamydia trachomatis Ia/SotonIa1 plasmid pSotonIa1 sequence | HE603236 | GBK | FAA | FNA | FFN | TAB |
HE601808 | 41.31 | 894 | 1 | 1042630 | 8.95 | Chlamydia trachomatis Ia/SotonIa1 | HE601808 | GBK | FAA | FNA | FFN | TAB |
HE603237 | 36.32 | 8 | 1 | 7500 | 7.16 | Chlamydia trachomatis Ia/SotonIa3 plasmid pSotonIa3 sequence | HE603237 | GBK | FAA | FNA | FFN | TAB |
Help
The phylogeny was build based on concatenated single copy orthologs with FastTree (default parameters). Nodes with black dots have support values lower than 1. The percentage of non-coding DNA of fragmented genomes was calculated based on data from contigs larger than 10 kilo bases. The completeness and contamination of each genome were estimated with checkM based on the identification of 104 "universal" marker genes.